Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_016165.1 Length=39283 Score E Sequences producing significant alignments: (Bits) Value seq476 86.0 2e-12 >seq476 Length=182463 Score = 86.0 bits (94), Expect = 2e-12 Identities = 118/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 24058 TCCTGAAGTTCGGCAAGGAAGCTTTCCGGATGCTGAACACCCGCCGGGCGCCCGGCGCGG 24117 |||| | ||||||||||| || |||||||| ||||| |||| |||||||| | Sbjct 121557 TCCTCACCTTCGGCAAGGAGGCCTTCCGGATCTACAACACTGGCCGCTCGCCCGGCCAGA 121498 Query 24118 ACAAGAAGCGCGTGCAGTATGGCTACGCCTCGGACCCGGTGGCGCTCGTTCAGGACGCGC 24177 ||| |||||| | ||| |||| || | ||| | | ||||| ||| |||||| Sbjct 121497 ACACCAAGCGCATCCAGGTTGGCCACATGGGTGCCCCCTTCGTGCTCGAGCAGCACGCGC 121438 Query 24178 TCGAAGGCGTGGTGCCGATCGAACACCAGCAAGAGGCGGAATCCA 24222 |||| || ||| ||||| | || ||||||| ||||| ||| ||| Sbjct 121437 TCGAGGGGGTGCTGCCGGTGGAGAACCAGCAGGAGGCCGAAGCCA 121393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 125576905838330