Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_016655.1 Length=51342 Score E Sequences producing significant alignments: (Bits) Value seq4651 111 5e-20 >seq4651 Length=474197 Score = 111 bits (122), Expect = 5e-20 Identities = 138/185 (75%), Gaps = 8/185 (4%) Strand=Plus/Minus Query 24820 ACGGAAAGCTGAGCTGCCAGCTCTACCAGCGCAGCGCGGACGTATTCCTCGGCGTGCCGT 24879 |||| |||||| ||||||||||| ||||||||||| ||| | ||||| ||||| || | Sbjct 349866 ACGGCAAGCTGTCGTGCCAGCTCTATCAGCGCAGCGCCGACATCTTCCTGGGCGTTCCCT 349807 Query 24880 TCAATATCGCGAGCTACGCGCTGCTGACCCATTTCTTCGCGGACCAGCT---CGGACTGA 24936 |||| ||||| ||||||||||| | || | | | || |||| | ||| || Sbjct 349806 TCAACATCGCCAGCTACGCGCTCTTCAC---GATGATGGTGGCCCAGGTGTGCGG-CTAC 349751 Query 24937 AGGTC-GGCGAATTCATCTGGACCGGCGGCGACGTCCACCTGTATTCGAACCACGTCGAG 24995 | | ||||| ||| | ||||||||||||||| |||||| || ||||||| ||||| Sbjct 349750 GCGCCGGGCGATTTCGTGTGGACCGGCGGCGACTGCCACCTCTACCTGAACCACCTCGAG 349691 Query 24996 CAGGC 25000 ||||| Sbjct 349690 CAGGC 349686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 164163525981136