Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_017972.1 Length=280538 Score E Sequences producing significant alignments: (Bits) Value seq4651 158 2e-33 >seq4651 Length=474197 Score = 158 bits (174), Expect = 2e-33 Identities = 301/439 (69%), Gaps = 11/439 (3%) Strand=Plus/Minus Query 22939 TATTTCCCTTTGCGGTCGGCGTAGGAAACTTCGCACTCTTCATCAGATTCAAAGAACAGA 22998 ||||| || |||||| |||||| ||||| || || || || |||||||| Sbjct 346515 TATTTACCGCCGCGGTCCTTGTAGGACGTGTCGCAGATCTCGTCGGACTCGAAGAACAGC 346456 Query 22999 ATTTGTGCGCAACCTTCGCCAGCGTAGATCAGTGCCGGGCTT-GGTGTGGTATTGGAAAA 23057 || || || |||||| ||||||||| || ||||| || ||||| ||||| || Sbjct 346455 ATCTGGGCCACGCCTTCGTTGGCGTAGATCT-TGGCGGGCAGCGGCGTGGTGTTGGAGAA 346397 Query 23058 CTCCAGAGTAAGCGAGCCTTTCCATTCTGGTTCCAGCGGCGTGACGTTTACGATGATGCC 23117 |||||| || | ||||| ||| || || || || ||||| || || ||||||||||| Sbjct 346396 CTCCAGCGTCACGTGGCCTTCCCACTCGGGCTCGAGGGGCGTCACATTGACGATGATGCC 346337 Query 23118 GCAACGCGCATACGTCGATTTGCCGAGGCAGATAACTAATACGTCACGCGGAATGTTGAA 23177 ||| ||||| || || |||||||| ||||| | | ||| ||||| ||| ||| Sbjct 346336 GCAGCGCGCGTAGGTGGATTTGCCCAGGCACACCGTGAGCACGCTGCGCGGGATGCGGAA 346277 Query 23178 GTGTTCCGGCGTGTTTGCCAGTGCGAAACTGTTCGGCGGAATGATCAGGCCTTGGCCGTT 23237 || ||| |||| ||||| ||||| ||||||||| ||||| | | |||| | Sbjct 346276 GTATTCGACCGTGCGGGCCAGCGCGAAGGAGTTCGGCGGGATGATGCACACGTCGCCGGT 346217 Query 23238 TGGAACGTGCTTCGTAACGAAATTGTCTTCGGTGAAATTCTTTGGATCGACAACCGCGTT 23297 ||| || ||||| ||| ||| ||| ||||| |||||||| | || | Sbjct 346216 --GAA-----ATC--CACGAAGTTGCGCTCGTCGAAGTTCTTCGGATCGACGATCGTGGA 346166 Query 23298 ATTCAGGTTGGTGAAAACCTTGAATTCGTTACCGCAACGAATATCGTAGCCGTAGCTGGA 23357 || | ||||||||| | |||||||||||| | || | |||||||||||||| || Sbjct 346165 GTTGATGTTGGTGAAGATCTTGAATTCGTTGGCCACGCGGACGTCGTAGCCGTAGCTCGA 346106 Query 23358 AACACCGTAGGGAATGATC 23376 ||||||| | |||| Sbjct 346105 GGTGCCGTAGGAGACGATC 346087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 897540226840560