Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_018452.1 Length=61847 Score E Sequences producing significant alignments: (Bits) Value seq476 244 4e-60 >seq476 Length=182463 Score = 244 bits (270), Expect = 4e-60 Identities = 255/335 (76%), Gaps = 0/335 (0%) Strand=Plus/Plus Query 9963 CATGGCATCCGTCAACAAAGTCATCCTCGTCGGCAATCTCGGCGCCGACCCGGAAACCCG 10022 |||||| || |||||||| || || || |||||||||| ||| ||||| |||||||| Sbjct 52639 CATGGCTTCGGTCAACAAGGTGATTCTTATCGGCAATCTGGGCAAGGACCCCGAAACCCG 52698 Query 10023 CTACCTCCCGAGCGGCGACGCAATCTCCAACATCCGCCTCGCTACGACCGATCGCTACAA 10082 |||| ||||||||||||||| |||| ||||||| || || || ||||| || Sbjct 52699 CTACGCCCCGAGCGGCGACGCGATCTGCAACATCACGCTGGCCACCACCGACAACTGGCG 52758 Query 10083 GGACAAGGCGAGCGGCGAGATGAAGGAATCGACCGAATGGCACCGCGTCAGCTTCTTCGG 10142 |||||||| | |||||| | | || | ||||||||||||||||| |||||||| Sbjct 52759 CGACAAGGCCACCGGCGAAAAGCGCGAGGCCACCGAATGGCACCGCGTGGTGTTCTTCGG 52818 Query 10143 CCGCCTCGCCGAGATCGTCGACGAGTACCTGCGCAAGGGCGCGCCGGTCTACATCGAGGG 10202 | ||||||||||||| || | ||||||||||||||||| | ||| || | || || Sbjct 52819 CAAGCTCGCCGAGATCGCCGGCCAGTACCTGCGCAAGGGCAGCCAGGTGTATGTGGAAGG 52878 Query 10203 CCGCATCCGCACGCGGAAGTGGCAGGATAACGCCGGCCAGGATCGCTACACGACCGAGAT 10262 | | | ||||| || ||||||||||| || | ||||||||| || ||||| ||||| || Sbjct 52879 CTCCCTGCGCACCCGCAAGTGGCAGGACAAGGACGGCCAGGACCGTTACACCACCGAAAT 52938 Query 10263 CGTCGCCGAGAAGATGCAGATGCTCGGCGACCGCC 10297 | ||||| ||||| ||||||||||| ||||| Sbjct 52939 CCGGGCCGACGAGATGAAGATGCTCGGCAGCCGCC 52973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 197777627034306