Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq4320 123 3e-23 >seq4320 Length=813811 Score = 123 bits (136), Expect = 3e-23 Identities = 202/289 (70%), Gaps = 4/289 (1%) Strand=Plus/Plus Query 197023 AGATCCTCGTCGCTAAAGCCCGTACCGATCTTACAAATGGATTCGTACATCTGGTTGTCG 197082 || ||||||||| || || || || || || || ||| | ||| | |||||| Sbjct 392099 AGGTCCTCGTCGGAGAATCCGGTTCCAATTTTGCAGATGCTCTGATACTCTTCGTTGTCT 392158 Query 197083 GGATTGTAACAGGCGAGTAAGAAAGCGCCGTAGGTTCCCGTTCTCTTTCCCACCCCGTTG 197142 | ||| ||||| || | |||| | |||||||| || |||| ||| ||| || ||| Sbjct 392159 TCGTCGTAGCAGGCAAGGAGGAAACCTCCGTAGGTGCCGGTTCGCTTGCCCCTGCCCTTG 392218 Query 197143 AAGCCTCCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTCCATGTAATCTTTCTTC 197202 |||||||||| || ||||||||||||| || | |||||| | |||||| || || Sbjct 392219 TAGCCTCCGATTACGACCAGATCCAGAGAATCTCCCACCCCCGAGAGGTAATCCTTTTTG 392278 Query 197203 AGTTTGAGCCAGCTTCTAGATCTCTTGGCAATCTCGTAGGTTGCGTTTACGTC--CAGGG 197260 || |||||||| | | || | ||||| || |||||||| || || | || |||| Sbjct 392279 AGCTTGAGCCAATTGCGGGAGCGTTTGGCGATTTCGTAGGTGGC--TTCCTTCTGGAGGG 392336 Query 197261 TCTTGATCATCAATCCCTCGCAATCTTCCTTCACGGCCTTGTTCATGAA 197309 | |||| ||| | ||| ||||| | |||| ||||| | || || ||| Sbjct 392337 TTTTGACCATGAGTCCTTCGCAGTTGCCCTTGACGGCTTCGTCCAGGAA 392385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676689359966160