Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_019445.1 Length=44784 Score E Sequences producing significant alignments: (Bits) Value seq743 91.5 4e-14 >seq743 Length=85660 Score = 91.5 bits (100), Expect = 4e-14 Identities = 125/172 (73%), Gaps = 2/172 (1%) Strand=Plus/Minus Query 1193 ACATGATATGCGCCGTACAGCCAGTACGTTGTTGCATGAGGCTGGTTATCCTTCAGACTG 1252 |||||| |||| || |||| ||| |||||| |||||||||| || || | ||||| Sbjct 13585 ACATGACTTGCGGCGCACAGGCAGCACGTTGCTGCATGAGGCCGGCTACAACACGGACTG 13526 Query 1253 GATTGAAAAGGCTCTGGCACATGAGCAGAAAGGTGTGCGCGCCGTATATAACAAAGCGGA 1312 |||||| ||| ||||| || |||||| ||| || | ||||| || ||||| || || Sbjct 13525 GATTGAGAAGTGCCTGGCGCACGAGCAGCGAGGCGTCAGGGCCGTCTACAACAAGGCCGA 13466 Query 1313 ATA-CGCCAGACAGCGCGCCTACATGTTGCAGCAGTGGGCCGATATGATTGA 1363 || ||| || ||||| | |||||||| | ||||| || ||||| || Sbjct 13465 GTACCGCGAG-CAGCGGACGGCGATGTTGCAAGACTGGGCGGACATGATCGA 13415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143179111444564