Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_019518.1 Length=44485 Score E Sequences producing significant alignments: (Bits) Value seq710 102 2e-17 >seq710 Length=104226 Score = 102 bits (112), Expect = 2e-17 Identities = 113/151 (75%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 10512 GCCCAATATTTCGGACTGGCCCAACGACGCAAGCGTGTGTTTGTTGTCGCAAGTGCTCGA 10571 || |||| |||||| | | ||||| |||| ||| || ||| ||||||||||||||||| Sbjct 59944 GCTCAATTTTTCGGCGTCCCACAACGGCGCAGGCGCGTCTTTCTTGTCGCAAGTGCTCGA 59885 Query 10572 AAAGGATTTGATCCCGCAGAAGTATTATTTGAGCGCGAAGGCGTGCGAAGGGATTCTCCG 10631 | || | |||||||| | |||||||||||||| | | ||| ||| || ||| | || Sbjct 59884 ACAGACCTCGATCCCGCCGCAGTATTATTTGAGCCCCACGGCCTGCAGCGGCATTTTGCG 59825 Query 10632 CCGAGCCGAGAAGCGTTGCAAGAAGCTGCCG 10662 ||| || | || || |||||| |||||| Sbjct 59824 CCGGGCAGCCAAACGGGGCAAGACACTGCCG 59794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 142222365493598