Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_019544.1 Length=49335 Score E Sequences producing significant alignments: (Bits) Value seq4651 147 7e-31 >seq4651 Length=474197 Score = 147 bits (162), Expect = 7e-31 Identities = 415/630 (66%), Gaps = 8/630 (1%) Strand=Plus/Minus Query 45494 GATCGGACGGGAACAGGCACATTGTCGGTGTTCGGCCGTCAGCTGCGCTTTAA-CTTGCA 45552 || || || || || ||||| | ||||| |||||| | ||| ||||||| | || || Sbjct 350275 GACCGCACCGGCACCGGCACCCTCTCGGTCTTCGGCTGGCAGATGCGCTTCGATCTCGCC 350216 Query 45553 GGACGGATTCCCGCTCGTGACGACGAAAAAGTTGCATATCCGCTCGATCATTTATGAACT 45612 | |||| || ||||| | || || || ||| | || | |||||||||||| | || || Sbjct 350215 G-ACGGTTTTCCGCTGCTCACCACCAAGAAGCTCCACACCCGCTCGATCATCCACGAGCT 350157 Query 45613 GCTCTGGTTTTTAAAAGGCGATACGAATGTTCGCTATTTGCAGGAGAATGGTGTGACGAT 45672 ||| ||||| | ||||| || || | || ||| | |||| || || |||| Sbjct 350156 GCTGTGGTTCCTGCGCGGCGACACCAACATCCGGTATCTCAAGGACAACAAGGTTTCGAT 350097 Query 45673 TTGGGACGAGTGGGCCGATGAAAACGGCGATCTCGGCCCAATCTACGGCGCGCAATGGCG 45732 ||||||||||||||||| || |||||||| || ||||| | |||||| ||| ||||| Sbjct 350096 CTGGGACGAGTGGGCCGACGAGAACGGCGAGCTGGGCCCGGTGTACGGCAAGCAGTGGCG 350037 Query 45733 GTCGTGGAAAGGGGCTGACGGGAAAACGGTCGACCAAATTGCGGC--GGTCTTTAAGGAA 45790 ||| || | | |||||| | ||||||| || |||| | || | ||| Sbjct 350036 CCGCTGGGAAACGCCCGACGGGCGCAGCATCGACCAGAT--CGGCCAGCTCATCGAGGCG 349979 Query 45791 ATCAAGCGCAACCCGAACTCGCGGCGGTTGCTTGTGAGCGCGTGGAACGTGGCAAAGTTG 45850 ||||| |||||| |||| || || | ||| || |||||| ||| | || Sbjct 349978 CTCAAGAAGAACCCGGACTCCCGCCGCCACATCGTGTCGGCCTGGAACCCGGCCGACGTG 349919 Query 45851 GGGGAAATGAAGTTGCCCCCATGTCATTACGC-CTTTCAGTTTTACGTCGCGAATGGCCG 45909 | ||| |||| || || || ||| || ||||| ||||| || | ||| Sbjct 349918 GACCGCATGGCCCTGCCGCCCTGCCA-CGCGCTGTTCCAGTTCTACGTGGCCGACGGCAA 349860 Query 45910 GTTGTCATGCATGTGGCAACAGCGTTCTGTCGATACATTTCTAGGATTGCCGTTTAACAT 45969 | |||| ||| | | ||||| | ||| | || || || | || || ||||| Sbjct 349859 GCTGTCGTGCCAGCTCTATCAGCGCAGCGCCGACATCTTCCTGGGCGTTCCCTTCAACAT 349800 Query 45970 CGCTAGCTATGCGCTGTTGACACATATGGTTGCCCAACAATGCGACCTCGATGTCGGCGA 46029 ||| ||||| ||||| || || ||||| ||||| |||| | || ||||| Sbjct 349799 CGCCAGCTACGCGCTCTTCACGATGATGGTGGCCCAGGTGTGCGGCTACGCGCCGGGCGA 349740 Query 46030 ACTCATTTTCACCGGCGGCGACGTCCATTTGTACAAAAATCATCTGGAACAAGCGAAACT 46089 || | | |||||||||||| ||| | ||| || || || || || || || Sbjct 349739 TTTCGTGTGGACCGGCGGCGACTGCCACCTCTACCTGAACCACCTCGAGCAGGCCCGCCT 349680 Query 46090 GCAGCTGACGCGCGAGCCGCGCCCGCTGCC 46119 |||||| | |||||||| ||||| ||||| Sbjct 349679 GCAGCTCTCCCGCGAGCCCCGCCCCCTGCC 349650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157741488778498