Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_019708.1 Length=37595 Score E Sequences producing significant alignments: (Bits) Value seq1398 131 4e-26 >seq1398 Length=15916 Score = 131 bits (144), Expect = 4e-26 Identities = 194/273 (71%), Gaps = 9/273 (3%) Strand=Plus/Minus Query 3674 GATCGGGCAGGACTACTGG---GGTGAAGGCGTAACAGCCAAACGTATCGCCGGTGCGCT 3730 |||||| |||||| ||| ||||||||| || || || || ||| ||| || || Sbjct 14282 GATCGGCGAGGACTGGTGGACAGGTGAAGGCACTACGGCTAAGCGCATCAGCGGAGCCCT 14223 Query 3731 TCGGGCGATGAATGGCGCCGA---CGTCACGGTCAATATTAACTCCCCTGGCGGGGACAT 3787 ||| || || |||| | | || ||||||| | || ||| ||||||||| ||| | Sbjct 14222 TCGCGCCATC---GGCGACAAGCACGCCACGGTCTACATCAACAGCCCTGGCGGCGACGT 14166 Query 3788 GTTCGAAGGCCTGGCCATCTACAACCTTCTGCGTGAATACGAAGGCCGTGTGACTGTGAA 3847 |||||| |||||||| ||||||||||| ||||| || ||| | | ||||| || || Sbjct 14165 GTTCGAGGGCCTGGCGATCTACAACCTGCTGCGCGAGCACGCGGCAGGCGTGACCGTCAA 14106 Query 3848 GGTGCTCGGTATTGCCGCCAGCGCCGCCTCGGTCATTGCGATGGCCGGGGATGAAATTCA 3907 |||| |||| | || |||||||| || || |||| || ||||| ||| | | Sbjct 14105 GGTGGTCGGCGTGGCGGCCAGCGCGGCGGCGATCATCGCCATGGCGGGGTCGCGGGTGGA 14046 Query 3908 GATCGGCCGTGGTGCCTTCCTGATGATCCACAA 3940 | | | ||| | | |||||||||||||||||| Sbjct 14045 GGTTGCCCGAGCCGGCTTCCTGATGATCCACAA 14013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 120175610971338