Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_019716.1 Length=44510 Score E Sequences producing significant alignments: (Bits) Value seq2015 120 9e-23 >seq2015 Length=8975 Score = 120 bits (132), Expect = 9e-23 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 16210 ATTGCCCGTTACGGTCGTAACGTCACGAAGATGGATGCCTTTGGCTGTACCAGGCGGGGG 16269 |||||||||||||||| |||||||| |||| |||||||| ||||||||| ||| || Sbjct 7777 ATTGCCCGTTACGGTCTCAACGTCACCGAGATCGATGCCTTCGGCTGTACCTCGCGCGGT 7718 Query 16270 CAGGCGCACCGCGCCGGGCTGTGGCTGATTAAAACGGAACTGCTGGAGACGCAGACCGTG 16329 ||||| | ||| |||| | |||| | | |||| |||| |||||| | |||| | || Sbjct 7717 CAGGCCCGTCGCACCGGCCAGTGGATCTTGCAAACCGAACGGCTGGAAAAGCAGTCGGTC 7658 Query 16330 GACTTCAGCGTGGGTGCCGAAGGGCTTCGCCATGTGCCGGGCGATGTTATTGAAATCTGT 16389 ||||| || || |||||| | ||| |||| || ||| | ||||||||| | Sbjct 7657 AGCTTCAATGTCGGGCGCGAAGGCATGAAACATCTGCCAGGGGATATCATTGAAATCGTT 7598 Query 16390 GATGATGACTATGCCGGTATCAGCACCGGCGGGCGC 16425 ||| | | ||| || | | | ||| ||| |||||| Sbjct 7597 GATAACCAGTATACCTGCAGCCGCAGCGGTGGGCGC 7562 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 142302360974448