Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_019721.1 Length=40029 Score E Sequences producing significant alignments: (Bits) Value seq1398 127 5e-25 >seq1398 Length=15916 Score = 127 bits (140), Expect = 5e-25 Identities = 193/275 (70%), Gaps = 0/275 (0%) Strand=Plus/Minus Query 4381 CGTGACCTGCTGGCGCAGGGCCGCATCTCCAGCAACGCTCTGGAATACGTCCGTGAAGAG 4440 |||||||||||| |||||||| | || ||||| | || |||||||||||| | Sbjct 13175 CGTGACCTGCTGAATTGGGGCCGCACCACCTCGAACGCCATCGAGTACGTCCGTGAACTG 13116 Query 4441 GTGTTTACCAATAACGCCGACGTGGTGGCCGAGAAAGCGCTGAAGCCCGAATCGGATATC 4500 |||| || || |||||| | |||||| ||| || ||||| | || |||||| Sbjct 13115 CTGTTCACGAACAACGCCAATGTGGTGAGCGAACTGGCAACCAAGCCTCAGTCCGATATC 13056 Query 4501 ACCTTCAGTAAGCAAACCGCGAACGTGAAGACGATCGCCCACTGGGTGCAGGCATCGCGT 4560 || ||| | | |||| |||| ||| |||||||||||| | | || || Sbjct 13055 ACGTTCGAGCTGGAGTCCGCACCCGTGGCGACCATCGCCCACTGGATTCGCGCTTCCAAG 12996 Query 4561 CAGGTTATGGACGATGCGCCAATGCTGCAGTCATACGTCAACAACCGCCTCATGTACGGC 4620 ||||| ||| || || || ||||||||||| ||| || || |||||| ||||||||| Sbjct 12995 CAGGTGCTGGCTGACGCCCCCATGCTGCAGTCGTACATCGACGGCCGCCTGATGTACGGC 12936 Query 4621 CTGGCGCTGAAGGAGGAAGGTCAACTGCTGAACGG 4655 ||| ||||||||| || || |||||||| || Sbjct 12935 CTGAAGCTGAAGGAAGAGCAGCAGCTGCTGAAGGG 12901 Score = 80.6 bits (88), Expect = 7e-11 Identities = 80/104 (77%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 2889 TTTGGCGTACCGCCTCACCTTGTCGGCGACGTCGAGAAATCAACGAGCTGGGGATCGGGC 2948 ||||| || ||||| ||| | |||||| | |||||| || ||||||||||| | ||| Sbjct 14780 TTTGGTGTGCCGCCGCACATGGTCGGCCATTCCGAGAAGTCTACGAGCTGGGGCACCGGC 14721 Query 2949 ATCGAGCAGCAGAATCTCGGCTTCCTGCAGTACACCCTGCAGCC 2992 ||||||||||||| | ||||||||| | ||| |||| ||| Sbjct 14720 ATCGAGCAGCAGATGATTGGCTTCCTGACCTTCACGCTGCGGCC 14677 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127963970986894