Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_019723.1 Length=47090 Score E Sequences producing significant alignments: (Bits) Value seq2015 100 9e-17 >seq2015 Length=8975 Score = 100 bits (110), Expect = 9e-17 Identities = 216/319 (68%), Gaps = 8/319 (3%) Strand=Plus/Minus Query 16482 CAGCGCCCTGAAGGACCGCCATAATGCCGTTGAGGTGAACTGGATTGACCCGAACAACGG 16541 |||||||| ||||| || |||| || | | ||| || | || || ||| || Sbjct 7877 CAGCGCCCAGAAGGCACGGCATACGGCGGCGCATGTGCGCTATGTCGATCCCGCCAATGG 7818 Query 16542 CTGGGAGACGGCGACAGAGCTTGTT---GAAGATACGCAGGCCATTGCCCGTTACGGTCG 16598 |||| |||| ||||| || ||| || ||| | | |||||||||||||||| Sbjct 7817 CTGGAAGACCGCGACGGAATACGTTTCTGACGATGTGATG---ATTGCCCGTTACGGTCT 7761 Query 16599 TAATGTTACGAAGATGGATGCCTTTGGCTGTACCAGCCGGGGGCAGGCACACCGCGCCGG 16658 || || || |||| |||||||| ||||||||| || || ||||| | ||| |||| Sbjct 7760 CAACGTCACCGAGATCGATGCCTTCGGCTGTACCTCGCGCGGTCAGGCCCGTCGCACCGG 7701 Query 16659 GCTGTGGCTGATTAAAACAGAACTGCTGGAAACGCAGACCGTGGATTTCAGCGTC-GGCG 16717 | |||| | | |||| |||| |||||||| |||| | || |||| ||| |||| Sbjct 7700 CCAGTGGATCTTGCAAACCGAACGGCTGGAAAAGCAGTCGGTCAGCTTCAATGTCGGGCG 7641 Query 16718 CAGAAGGGCTTCGCCATGTACCGGGCGATGTTATTGAAATCTGCGATGATGACTATGCCG 16777 | ||||| | ||| | || || ||| | ||||||||| ||| | | ||| || Sbjct 7640 C-GAAGGCATGAAACATCTGCCAGGGGATATCATTGAAATCGTTGATAACCAGTATACCT 7582 Query 16778 GTATCAGCACCGGTGGTCG 16796 | | | ||| |||||| || Sbjct 7581 GCAGCCGCAGCGGTGGGCG 7563 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150557894598168