Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_019917.1 Length=62952 Score E Sequences producing significant alignments: (Bits) Value seq476 185 4e-42 >seq476 Length=182463 Score = 185 bits (204), Expect = 4e-42 Identities = 240/331 (73%), Gaps = 8/331 (2%) Strand=Plus/Plus Query 9695 CATGGCATCCGTCAACAAAGTCATCCTCGTCGGCAATCTCGGTGCCGACCCGGAAACCCG 9754 |||||| || |||||||| || || || |||||||||| || ||||| |||||||| Sbjct 52639 CATGGCTTCGGTCAACAAGGTGATTCTTATCGGCAATCTGGGCAAGGACCCCGAAACCCG 52698 Query 9755 CTATCTCCCGAGCGGCGACGCAATCTCCAACATCCGCCTCGCGACGACCGATCGTTACAA 9814 ||| ||||||||||||||| |||| ||||||| || || || ||||| | Sbjct 52699 CTACGCCCCGAGCGGCGACGCGATCTGCAACATCACGCTGGCCACCACCGACAACTGGCG 52758 Query 9815 GGACAAAGCCAGCGGCGACTTCAAA----GAAGTGACCGAGTGGCACCGCGTCGCCTTCT 9870 ||||| |||| |||||| ||| || | ||||| ||||||||||| | |||| Sbjct 52759 CGACAAGGCCACCGGCGA----AAAGCGCGAGGCCACCGAATGGCACCGCGTGGTGTTCT 52814 Query 9871 TCGGCCGCCTCGCCGAGATCGTCGACGAGCACCTGCGCAAGGGCGCATCGGTCTACATCG 9930 ||||| ||||||||||||| || | || |||||||||||||| ||| || | | Sbjct 52815 TCGGCAAGCTCGCCGAGATCGCCGGCCAGTACCTGCGCAAGGGCAGCCAGGTGTATGTGG 52874 Query 9931 AGGGGCGCATCAAAACGCGGAAGTGGCAGGATCAATCCGGCCAGGATCGCTACACGACCG 9990 | || | | || || ||||||||||| | ||||||||| || ||||| |||| Sbjct 52875 AAGGCTCCCTGCGCACCCGCAAGTGGCAGGACAAGGACGGCCAGGACCGTTACACCACCG 52934 Query 9991 AGATCGTCGCCGACAAGATGCAGATGCTCGG 10021 | ||| |||||| ||||| |||||||||| Sbjct 52935 AAATCCGGGCCGACGAGATGAAGATGCTCGG 52965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 201309928191501