Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_019932.1 Length=29564 Score E Sequences producing significant alignments: (Bits) Value seq378 93.3 8e-15 seq265 82.4 1e-11 >seq378 Length=222826 Score = 93.3 bits (102), Expect = 8e-15 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 27258 CCAGTCCTGCACGGGTACGCTCAACAATCAGCTCGCGCTCCATTTCCGCCAGCGCCCCCA 27317 ||||||| || ||||| ||||| || |||| ||||| |||||||| |||||| | ||| Sbjct 58257 CCAGTCCGGCGCGGGTCCGCTCGACGGTCAGTTCGCGTTCCATTTCGGCCAGCCTCGCCA 58198 Query 27318 TAACATGAAAAAAGAAGCGGCCCATTGGCGTACTGGTATCAATGCTGTCGGTCAGGCTGC 27377 | || || || ||||| ||||| |||| | ||| || ||| |||||||||||| | Sbjct 58197 TGACGTGGAAGAAGAACCGGCCGGAAGGCGCGCCGGTGTCGATGGCGTCGGTCAGGCTCC 58138 Query 27378 GGAAGTTTATTCCTTTTTCGCGCAGTTCCTCAGTCAGCATAACCAGATGGCGCATGCTGC 27437 ||| | | || | | |||| || | ||| |||| || | | || Sbjct 58137 TGAACTGGACGCCGTGCCTGTGCAGATCGCCGACCAGATCGACCAACTGCCTGACCGAGC 58078 Query 27438 GGCCAAGACGATCCAGCTTCCACACCACCAGTGTGTCGCCTTCCTGCAG 27486 | || || || || |||||||| || ||||| |||||||| || |||| Sbjct 58077 GCCCCAGCCGGTCGAGCTTCCAGACGACCAGGGTGTCGCCCTCGCGCAG 58029 >seq265 Length=448903 Score = 82.4 bits (90), Expect = 1e-11 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 13471 GCGCGCAATGCTATCCCCGCCACGCCTGCCCGCTTTATGCATCGTTTTTAATGCAGGTGC 13530 ||||||||||||||||||||| ||||||||||||| ||| | || |||| |||||| ||| Sbjct 362138 GCGCGCAATGCTATCCCCGCCTCGCCTGCCCGCTTCATGTAGCGCTTTTCATGCAGTTGC 362197 Query 13531 ATG 13533 ||| Sbjct 362198 ATG 362200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 94477862703084