Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_020837.1 Length=198013 Score E Sequences producing significant alignments: (Bits) Value seq888 98.7 1e-15 >seq888 Length=58548 Score = 98.7 bits (108), Expect = 1e-15 Identities = 202/297 (68%), Gaps = 14/297 (5%) Strand=Plus/Plus Query 117571 GTGGACTCTCTCGCTGCCCTGACGGGGTACTCCTGGTAGTCGATGAGTTCTTCCAGACCA 117630 |||| | | | ||| ||| |||||||||| ||||||||||||| || | || || || Sbjct 23657 GTGGCCACGCGCGCAGCCTTGACGGGGTAGTCCTGGTAGTCGAGCAGGGCATCGAGCGCA 23716 Query 117631 CGAACAGCAAGGTCACATAGGTTCTCCATCTCCTCAAGGTTCTTGAGTTTGCCAACGTTG 117690 || || ||||| | ||||| |||| ||| || || | || ||| | |||| Sbjct 23717 CGCACGATCAGGTCGGACAGGTTTTCCAGCTCATCGAGCGATTCCAGCGCGCCCAGGTTG 23776 Query 117691 ATAGCAGACAGAATGCACAGAGCAATCTCACC---ATCACCATCGATAT-GTTCAATGGG 117746 | || ||||| ||||||| || ||||| || ||| ||| ||||| |||| | || Sbjct 23777 AAGGCCGACAGCGTGCACAGCGCGATCTCGCCGTTTTCATCATTGATATCGTTC-AGCGG 23835 Query 117747 ATCTGTAGGCAGGGTGATCTCCTGACACAGGTTGGACATGTTCA------CCTTGT---C 117797 | || ||||| ||||||| |||||||||||| | || |||| | | Sbjct 23836 CTTGGTGGGCAGCAGGATCTCCATGCACAGGTTGGACTGGCGCACGGGTGCCTTCTGCGC 23895 Query 117798 CAGGAAGGAACTGTGAGTGTTGCAGTGGTCGATGTTCATCAGGTAGATGCGACCAGT 117854 ||| | ||||| |||||||||||||| | |||| | ||||||||| || || Sbjct 23896 GTCGAACGGGCTGTGCGTGTTGCAGTGGTCCACGTTCTGGATGTAGATGCGGCCGGT 23952 Score = 89.7 bits (98), Expect = 7e-13 Identities = 99/132 (75%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 116015 GTGCTGTGACTCATCACGAGCAATCAGACCGATGATCTTTGCATTGCCTTCCATCATCTT 116074 |||| | | ||| ||||| || || || | ||||||||| || ||||||||||| | ||| Sbjct 22159 GTGCAGCGCCTCGTCACGCGCGATGAGGCGGATGATCTTGGCGTTGCCTTCCATGAGCTT 22218 Query 116075 GAGTTCACCAAAAGCAAACGAGCAAGCGAAAGAAACATAGAAACGAATACCCTCAAGGAT 116134 | | || | || || |||||||| ||||| || ||||| || || |||||||||| Sbjct 22219 GCGCTCGGCGAAGGCGAACGAGCACGCGAAGCTCACGTAGAAGCGGATCGCCTCAAGGAT 22278 Query 116135 ATACACATTCAT 116146 | ||| ||||| Sbjct 22279 GTTCACGTTCAT 22290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633475929697560