Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq4280 161 1e-34 seq4491 84.2 3e-11 >seq4280 Length=912600 Score = 161 bits (178), Expect = 1e-34 Identities = 786/1239 (63%), Gaps = 26/1239 (2%) Strand=Plus/Plus Query 75201 TCATGGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACA 75260 || ||||| |||||| ||||||| |||||||| || || || |||||||| ||||| | Sbjct 355987 TCGTGGAACGGCCACAGCACATGTTGATGCGGGTTGCCATTGGAATCCACGGCGAAGATA 356046 Query 75261 TTGATTCTGTCTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACA 75319 | || ||| | | ||||| ||| | | |||| | || ||| |||| ||| || | Sbjct 356047 TCGACGCTGCCATTGAGACGTACAATTTGCTGTCGGAGAGATAT-TTCACTCATGCTTCG 356105 Query 75320 CCAACCCTCTTCAATGCTG-GTACACCAA--GACCGCAGATGTCCAGTTGCTTCCTTATC 75376 ||||| | || ||| | | |||| |||| ||| |||| |||||||| | Sbjct 356106 CCAACGATGTT---TGCGGCGGCCACCTGCCGACCTCAGCTGTCGTCCTGCTTCCTGTTG 356162 Query 75377 GCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATC 75436 ||| | || ||| ||| | || ||||| | || | | | |||||||| || Sbjct 356163 ACCATGAGCGACGACAGCATCGAGGGAATCTACGACACCTTGAAGCAGTGTGCGTTGATT 356222 Query 75437 TCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGT 75496 || || | |||||| || || || || | | ||| | ||||| || | | Sbjct 356223 TCGAAATCGGCTGGAGGAATCGGCCTGAATGTTCATTGCATCAGAGCAAAGGGAACCTAC 356282 Query 75497 ATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCC 75556 ||| || || || || || | ||| | ||||| ||| | | || | || | Sbjct 356283 ATTGCTGGCACGAACGGAATTTCCAACGGTTTGATTCCCATGTTGAGGGTGTACAATAAC 356342 Query 75557 ACAGCGCGCTATGTAAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTAC 75610 || || || || |||| | || ||| || ||| | || | || | || Sbjct 356343 ACTGCCAAGTACGTTGATCAGGGAGGTAACAAGCG--GCCAGGTG-CCTTTGCCATTTAT 356399 Query 75611 TTGGAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGAC 75670 | ||||| ||||||| |||| | | |||||||| || ||| ||| || | Sbjct 356400 CTCGAACCGTGGCATGGCGATGTTTTCGAGTTCCTGGATTTAAAGAAGAACACCGGCGCT 356459 Query 75671 GAAGAGGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAG 75730 ||||| | || || || | || | | || |||||||| || | ||||||||| Sbjct 356460 GAAGATGTCCGAGCCAGGGACATGTTCTACGCGCTTTGGATTCCGGATTTGTTCATGAAG 356519 Query 75731 CGGGTTGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCC 75790 || || |||| | | |||| | | || || | | || || || ||| Sbjct 356520 CGAGTGGAGGCTAACGAAGACTGGTGCTTGATGTGCCCTCATGAATGTCCTGGGCTATCC 356579 Query 75791 GACGCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCC 75850 ||| | |||||||||||||||| || |||||| || |||| ||| || || | Sbjct 356580 GACACATGGGGTGAGGAGTTTGAAAAACTGTACACATCATACGAAGCGGAAGGACGATAC 356639 Query 75851 AATGCGACTGTACCAGCCGCCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACT 75910 | | || || |||| ||| | ||| || || || | || || ||| || Sbjct 356640 ATTCGGAAAGTGAAAGCCCAAGATTTGTGGTTTGCAATCATCGAGTCCCAAGTGGAAACC 356699 Query 75911 GGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTG 75970 || || || ||||| || ||||||||||| |||| ||| ||||| || |||| | Sbjct 356700 GGTGTTCCGTACATGCTGTATAAGGATGCTTGCAACAGGAAAAGTAATCAGCAGAACATC 356759 Query 75971 GGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAG 76030 ||||| |||||| ||||||| |||||||| |||||| | || ||| | |||||||| Sbjct 356760 GGAACCATCAAGTGCTCAAACCTTTGCACCGAAATTGTTGAATACTCCTCCAAGGATGAA 356819 Query 76031 ACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGC 76090 | |||||||| || | || || ||||| | | || || || | ||| | Sbjct 356820 ATTGCTGTTTGTAACCTAGCGTCCATCGCATTGAACATGTTCGTGAA--ACCCGACAAG- 356876 Query 76091 ACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGA 76150 || | ||||| ||||||| | ||| | |||| |||| || || ||||| ||| | Sbjct 356877 ACATATGATTTCCAAAAACTGAAAGAAGTAGCAAAAATTGCCACTAAGAATCTCAACAAA 356936 Query 76151 GTCATTGACAGAAATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATATGCGACAC 76207 |||| |||| ||||| ||||| || ||| | |||| || |||||||| ||| Sbjct 356937 ATCATCGACATTAATTTCTATCCAGTGCCAGAGGCCAAGCGA---TCCAATATGCGCCAC 356993 Query 76208 AGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCA 76267 | || || || | ||||| || || | || |||| || |||||| || || | Sbjct 356994 CGCCCGATCGGAATCGGTGTCCAGGGAATGGCCGATGCCTTCATTTTGATGCGTTATCCT 357053 Query 76268 TTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCA 76327 | || || ||||| | | ||||| | ||||| ||||| || || | | Sbjct 357054 TACGACAGCGAAGAAGCTCAAAAACTGAATCAGCAAATCTTCGAAACTATCTACTATGGT 357113 Query 76328 TCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGT 76387 || | || || || ||||||||||| ||| | ||| |||| || || | | ||| Sbjct 357114 GCCTTAGAAGCAAGCTGTGAATTGGCCGAAAAGGAGGGTACCTACGAAACCTATCCGGGA 357173 Query 76388 TCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGG 76426 | ||| | | | | || || || |||| ||||||||| Sbjct 357174 TGTCCGGTGAGCAAGGGAGTTCTGCAGTACGATATGTGG 357212 >seq4491 Length=604133 Score = 84.2 bits (92), Expect = 3e-11 Identities = 171/250 (68%), Gaps = 8/250 (3%) Strand=Plus/Minus Query 14356 TATGGCGGATGGTCTCAAGCCTTCACAGAGGAAAGTGATGTATGCTTGCTTC---CATAA 14412 ||||| ||||||||||||||| ||| | || || |||| | |||||| | ||| Sbjct 525285 TATGGTGGATGGTCTCAAGCCAGGTCAGCGAAAGGTTATGTTCACGTGCTTCAAGCGTAA 525226 Query 14413 GAATCTCAAGGATGAAATGAAGGTGGCACAACTGGCGGCATATGTCGCGGACAAGTCTGC 14472 || ||| |||| | ||||| || ||| |||| | | || || || | ||| || Sbjct 525225 CGAT---AAGCGTGAAGTCAAGGTTGCCCAATTGGCCGGTTCCGTTGCCGAAATGTCAGC 525169 Query 14473 GTACCACCATGGTGAAGTATC-CTTAGCGGACACGATTGTTAAGTTGGCAAACGACTACA 14531 ||||| ||||||||| || || |||| || ||||| || |||| | | || Sbjct 525168 CTACCATCATGGTGAACAGTCTCTGTGCGG-TACCATTGTCAATCTGGCTCAAAATTATG 525110 Query 14532 CGGGTTCAAACAACATTAACCTTCTTGAACCGTGTGGTCAATTTGGTACGCGTCTCATGG 14591 || |||||||| || || |||| ||| ||||||| || ||||| ||||| | Sbjct 525109 TCGGAAGTAACAACATCAATCTGCTTGTCCCGAGTGGTCAGTTCGGTACTCGTCTTGCCG 525050 Query 14592 GTGGTAAGGA 14601 |||||||||| Sbjct 525049 GTGGTAAGGA 525040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596534126480160