Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_020879.1 Length=161978 Score E Sequences producing significant alignments: (Bits) Value seq1121 86.0 6e-12 >seq1121 Length=24480 Score = 86.0 bits (94), Expect = 6e-12 Identities = 80/98 (82%), Gaps = 4/98 (4%) Strand=Plus/Minus Query 65883 TTTGGCGGAGACTATCCGATTTGAACGGATGGACCGTATTCCTACGATCGCCAGTTTTCA 65942 ||||||||||||| | |||| |||| | |||| || | || || ||| ||||||||| Sbjct 9137 TTTGGCGGAGACTGTGAGATTCGAACTCACGGACGGT-TGCC--CG-TCGGCAGTTTTCA 9082 Query 65943 AGACTGGTGGTTTAAGCCTCTCACCCAAGTCTCCAGAA 65980 |||||| |||||||| || ||||||||||||||| ||| Sbjct 9081 AGACTGCTGGTTTAAACCACTCACCCAAGTCTCCGGAA 9044 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 518170786437360