Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq251 107 3e-18 seq98 98.7 1e-15 seq986 89.7 8e-13 >seq251 Length=2698768 Score = 107 bits (118), Expect = 3e-18 Identities = 133/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || || | || || |||||||||| || ||||| | |||||||| || Sbjct 662947 ATGCAGATCTTCGTCAAGACCCTGACTGGAAAGACCATTACTCTTGAAGTCGAGCCATCC 663006 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| |||| |||||| || || || |||||||| |||||||| || ||||| || Sbjct 663007 GATACTATTGAAAACGTCAAGGCCAAGATCCAAGATAAGGAAGGCATTCCCCCAGACCAG 663066 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || | ||||| | ||||||||||||||| |||||| | | ||| | || || || || Sbjct 663067 CAGCGTTTGATCTTTGCCGGTAAGCAGCTGGAAGATGGCCGTACTCTTTCCGACTACAAC 663126 Query 156003 AT 156004 || Sbjct 663127 AT 663128 Score = 100 bits (110), Expect = 4e-16 Identities = 132/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 |||||| || || | || || |||||||||| || || || | |||||||| || Sbjct 663402 AATGCAGATCTTCGTCAAGACTCTGACTGGAAAGACCATCACTCTTGAAGTCGAGCCATC 663461 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 ||| | ||| |||||| || ||| || || ||||| ||||| || |||||||| || Sbjct 663462 TGACACCATTGAAAACGTCAAGGCTAAGATCCAGGATAAGGAAGGTATCCCTCCAGATCA 663521 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 || | ||||| | ||||||||||||||| |||||| | | ||| | || || || || Sbjct 663522 GCAGCGTTTGATCTTTGCCGGTAAGCAGCTGGAAGATGGCCGTACTCTTTCCGACTACAA 663581 Query 156002 TAT 156004 || Sbjct 663582 CAT 663584 Score = 95.1 bits (104), Expect = 2e-14 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || || | || || |||||||||| || || || || |||||||| || Sbjct 663631 ATGCAGATCTTCGTCAAGACTCTGACTGGAAAGACCATCACCTTGGAAGTCGAGCCATCA 663690 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | || ||| || || |||||| |||||||| ||||| || |||||||| || Sbjct 663691 GACACCATCGAAAATGTTAAGGCTAAAATCCAAGATAAGGAAGGTATCCCTCCAGATCAG 663750 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || | ||||| | ||||||||||| || |||||| | | ||| | || || || ||| Sbjct 663751 CAGCGTTTGATCTTCGCCGGTAAGCAACTGGAAGATGGCCGCACTCTGTCGGACTACAAT 663810 Query 156003 AT 156004 || Sbjct 663811 AT 663812 Score = 91.5 bits (100), Expect = 2e-13 Identities = 130/183 (71%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 |||||| || || | || || |||||||||| || || || | |||||||| || Sbjct 662718 AATGCAGATCTTCGTCAAGACTCTGACTGGAAAGACCATCACTCTTGAAGTCGAGCCATC 662777 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 ||| | ||| |||||| || ||| || || ||||| ||||| || || ||||| || Sbjct 662778 TGACACCATTGAAAACGTCAAGGCTAAGATCCAGGATAAGGAAGGAATCCCCCCAGATCA 662837 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 || | ||||| | |||||||||||||| |||||| | ||| | || || || || Sbjct 662838 GCAGCGTTTGATCTTCGCCGGTAAGCAGCTGGAAGATGGTCGTACTCTTTCCGACTACAA 662897 Query 156002 TAT 156004 ||| Sbjct 662898 TAT 662900 Score = 89.7 bits (98), Expect = 8e-13 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | || || ||||||||||| || || || || || || || || Sbjct 661807 ATGCAGATCTTTGTGAAGACTTTGACTGGAAAGACCATCACCTTGGAGGTTGAGCCATCC 661866 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| |||| ||| || || || || || ||||| ||||| || || ||||| || Sbjct 661867 GATACTATTGAAAATGTCAAGGCCAAGATCCAGGATAAGGAAGGTATCCCGCCAGATCAG 661926 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || | ||||| | |||||| |||||||| |||||| | | ||| | || || || || Sbjct 661927 CAGCGTTTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGTACTCTTTCCGACTACAAC 661986 Query 156003 AT 156004 || Sbjct 661987 AT 661988 Score = 89.7 bits (98), Expect = 8e-13 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | || || ||||||||||| || || || || || || || || Sbjct 662263 ATGCAGATCTTTGTGAAGACTTTGACTGGAAAGACCATCACCTTGGAGGTTGAGCCATCC 662322 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| |||| ||| || || || || || ||||| ||||| || || ||||| || Sbjct 662323 GATACTATTGAAAATGTCAAGGCCAAGATCCAGGATAAGGAAGGTATCCCGCCAGATCAG 662382 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || | ||||| | |||||| |||||||| |||||| | | ||| | || || || || Sbjct 662383 CAGCGTTTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGTACTCTTTCCGACTACAAC 662442 Query 156003 AT 156004 || Sbjct 662443 AT 662444 Score = 84.2 bits (92), Expect = 3e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || || |||| || |||||||||| || || || || || || || || Sbjct 662035 ATGCAGATCTTCGTTAAGACTCTGACTGGAAAGACCATCACCTTGGAGGTTGAGCCATCC 662094 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| |||| ||| || || || || || ||||| ||||| || || ||||| || Sbjct 662095 GATACTATTGAAAATGTCAAGGCCAAGATCCAGGATAAGGAAGGTATCCCGCCAGATCAG 662154 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978 || | ||||| | |||||||||||||| |||||| Sbjct 662155 CAGCGTTTGATCTTCGCCGGTAAGCAGCTGGAAGAT 662190 Score = 84.2 bits (92), Expect = 3e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || || |||| || |||||||||| || || || || || || || || Sbjct 662491 ATGCAGATCTTCGTTAAGACTCTGACTGGAAAGACCATCACCTTGGAGGTTGAGCCATCC 662550 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| |||| ||| || || || || || ||||| ||||| || || ||||| || Sbjct 662551 GATACTATTGAAAATGTCAAGGCCAAGATCCAGGATAAGGAAGGTATCCCGCCAGATCAG 662610 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978 || | ||||| | |||||||||||||| |||||| Sbjct 662611 CAGCGTTTGATCTTCGCCGGTAAGCAGCTGGAAGAT 662646 Score = 84.2 bits (92), Expect = 3e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || || | || || ||||||| || || || || | |||||||| ||| Sbjct 663175 ATGCAGATCTTCGTCAAGACTCTGACTGGTAAGACCATCACCCTTGAAGTCGAGCCATCT 663234 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| |||||| || ||| || || ||||| ||||| || || ||||| || Sbjct 663235 GACACCATTGAAAACGTCAAGGCTAAGATCCAGGATAAGGAAGGTATCCCGCCAGATCAG 663294 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978 || | ||||| | |||||||||||||| |||||| Sbjct 663295 CAGCGTTTGATCTTCGCCGGTAAGCAGCTGGAAGAT 663330 >seq98 Length=5729030 Score = 98.7 bits (108), Expect = 1e-15 Identities = 348/543 (64%), Gaps = 4/543 (1%) Strand=Plus/Plus Query 18162 CAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGTTAACCCGG 18221 |||| || |||| | ||||| || | || || ||||||| || |||| ||| | Sbjct 2603463 CAAATTCCATGTGCAGGCCTTCGTCACGTGAGATCAATTCGTAGGAGAATGTTAGCCCAG 2603522 Query 18222 GCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAAAAGAATATAC 18281 || | | || | || || | |||| || ||||||||||| | | ||||| || Sbjct 2603523 GCGTCAGTCCACGCTTCTTCAACCAATTGATGGATGCGAAACTTCCACTGAAGAAAATTT 2603582 Query 18282 CCTCAACGCACGCGAACGCTATTAATCTTTCAGCAAAACTGTATTTATTGCTCAGTATCC 18341 | || || ||||| |||| | | ||| | || || || ||||| ||| Sbjct 2603583 CTTCCACAACGGCGAAGGCTACGACGCGTTCTCCGAAGTTGGCCTTTTTGCTTGAATTCC 2603642 Query 18342 ATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTATAGCATTAAACA 18401 | || || | |||| ||| | ||| || | | | || || ||||| |||| Sbjct 2603643 AGTTCAATGTCTATTCAGCTTTCTTCTTCACACAGGGCAGATTATCGATGGCATTGAACA 2603702 Query 18402 AATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAATACATTTCAG 18461 | | || ||| ||||||||| |||||||| ||||| | || || ||||||||| Sbjct 2603703 AGTACTCCCTTTGTTTGGAATCACGAATATAAGTATCGATAAGCAGCGAGTACATTTCAC 2603762 Query 18462 AATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCGGGATATTGAA 18521 || | | ||||||| || || ||||| | ||| || | | ||||||| || | Sbjct 2603763 TGTGGACGTTTTCCATTGCCATTTGAAATCCATAGAAGCAACGTGCCTCGGTGACCTGGA 2603822 Query 18522 TCTCGCT--ATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAGATGCGAA 18579 ||| || | ||| | ||| || | ||||| || | | || || | || | || Sbjct 2603823 GCTC-CTGGCTGAAA-CGTTCCACGAGGTTCTCGTTCATGCTGCCATCGGAAGCGACAAA 2603880 Query 18580 AAATGCCAAAACATATTTAATGAAATGTTTTTCATTATCCTTGAGATTGTTCCATTCATC 18639 || ||||| |||| | ||||| || || || |||||| || | ||| || | Sbjct 2603881 GAAGGCCAATACATGTGAGATGAAGTGCTTCTCGCCTGACTTGAGCTTTTCCCAATCGGC 2603940 Query 18640 TATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGATTCGGCCTGTTTGTA 18699 || |||||| || ||||| ||||| || |||||| | ||||| || |||| || || Sbjct 2603941 TAGATCTTTAGAGAGATCGACTTCCTCTATTGTCCAGAGAGATGCCTCTGCCTACTTCTA 2604000 Query 18700 CAT 18702 ||| Sbjct 2604001 CAT 2604003 >seq986 Length=4314454 Score = 89.7 bits (98), Expect = 8e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | || || ||||||| || || || || | || ||||| ||| Sbjct 1408032 ATGCAGATTTTTGTGAAGACCCTGACTGGCAAGACCATCACTCTGGAGGTCGAGCCTTCC 1408091 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | || ||||||||| ||||| || || || ||||| || |||||||| ||| Sbjct 1408092 GACACCATCGAAAACGTGAAGGCCAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAA 1408151 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||| | |||| | || |||||||||||||| || | | ||| | ||||| || || Sbjct 1408152 CAACGTCTGATCTTCGCTGGTAAGCAGCTCGAGGACGGCCGTACTCTGTCAGACTACAAC 1408211 Query 156003 ATATCCAAAGAGGCGACGCTTCAT 156026 || ||||| | || |||||| Sbjct 1408212 ATCCAGAAAGAATCTACCCTTCAT 1408235 Score = 86.0 bits (94), Expect = 9e-12 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || || | || || |||||||| || || || || | || ||||| ||| Sbjct 1407348 ATGCAGATCTTCGTGAAGACCTTGACTGGCAAGACCATCACTCTGGAGGTCGAGCCTTCG 1407407 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | || |||||| || || || || || || |||||||| |||||||| ||| Sbjct 1407408 GACACAATCGAAAACGTTAAGGCCAAGATCCAGGACAAGGAAGGCATCCCTCCAGATCAA 1407467 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || | |||| | |||||||||||||||||| ||| | ||| | ||||| || || Sbjct 1407468 CAGCGTCTGATCTTTGCCGGTAAGCAGCTCGAGGATGGTCGTACTCTGTCAGACTACAAC 1407527 Query 156003 AT 156004 || Sbjct 1407528 AT 1407529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731828481061200