Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_021531.1 Length=223989 Score E Sequences producing significant alignments: (Bits) Value seq4651 158 2e-33 seq4037 87.8 3e-12 >seq4651 Length=474197 Score = 158 bits (174), Expect = 2e-33 Identities = 184/246 (75%), Gaps = 2/246 (1%) Strand=Plus/Minus Query 98946 AAGAAAGACCGTACCGGTACAGGCACGCTTTCTATCTTCGGCCACCAGATGCGTTTCAA- 99004 |||| ||||| ||||| || ||||| || || |||||||| |||||||| ||| | Sbjct 350281 AAGATGGACCGCACCGGCACCGGCACCCTCTCGGTCTTCGGCTGGCAGATGCGCTTCGAT 350222 Query 99005 CTTGCAAGAAGGTTTCCCGCTGGTAACGACCAAGCGTTGCCACCTGCGCTCTATTATCCA 99064 || || || ||||| |||||| | || |||||| |||| ||||| || ||||| Sbjct 350221 CTCGCC-GACGGTTTTCCGCTGCTCACCACCAAGAAGCTCCACACCCGCTCGATCATCCA 350163 Query 99065 TGAACTGCTGTGGTTCCTGAAAGGCGACACCAATATCCAGTACCTGAAAGATAATGGTGT 99124 || ||||||||||||||| ||||||||||| |||| ||| || || || || || Sbjct 350162 CGAGCTGCTGTGGTTCCTGCGCGGCGACACCAACATCCGGTATCTCAAGGACAACAAGGT 350103 Query 99125 AACCATTTGGGACGAATGGGCGGACAAAAATGGCGACCTCGGTCCGGTATACGGTAAGCA 99184 | || |||||||| ||||| ||| | || ||||| || || ||||| ||||| ||||| Sbjct 350102 TTCGATCTGGGACGAGTGGGCCGACGAGAACGGCGAGCTGGGCCCGGTGTACGGCAAGCA 350043 Query 99185 GTGGCG 99190 |||||| Sbjct 350042 GTGGCG 350037 >seq4037 Length=4543 Score = 87.8 bits (96), Expect = 3e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 98982 TTCGGCCACCAGATGCGTTTCAACTTGCAAGAAGGTTTCCCGCTGGTAACGACCAAGC-G 99040 |||||| |||||||||| ||| || || | || || || |||||||| || |||||| | Sbjct 4139 TTCGGCTACCAGATGCGCTTCGACCTGAACGAGGGCTTTCCGCTGGTGACCACCAAGAAG 4198 Query 99041 TTGCCACCTGCGCTCTATTATCCATGAACTGCTGTGGTTCCTGAAAGGCGACACCAATAT 99100 ||| ||||| || || ||| || |||||||||||||| | || || | | | Sbjct 4199 GTGC-ACCTGAAGTCCATCATCGTCGAGCTGCTGTGGTTCCTTACCGGTTCCAGCGACAA 4257 Query 99101 CCAGTACCTGAAAGATAATGGTGTAACCATTTGGGACGAATGGGCGGACAAAAATGGCGA 99160 | | | ||||| || || || || || |||||||| |||||| | || | ||| Sbjct 4258 CAACTGGCTGAAGGAACGCGGCGTGACGATCTGGGACGAGTGGGCGCGCGAAGACGGCAG 4317 Query 99161 CCTCGGTCCGGTATACGGTAAGCAGTGGCG 99190 | | || || || ||||| ||||||||| Sbjct 4318 CTTGGGCCCCGTCTACGGCGTGCAGTGGCG 4347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716594186984280