Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_021534.1 Length=47552 Score E Sequences producing significant alignments: (Bits) Value seq476 95.1 4e-15 >seq476 Length=182463 Score = 95.1 bits (104), Expect = 4e-15 Identities = 121/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 33244 GGCGGCGCTGTGTGCAATCTGTCTCTGGCAACATCAGAGCAGTGGAACGATAAAGCAACA 33303 |||| ||| | ||||| | | ||||| || | || | ||| ||| || || || Sbjct 52712 GGCGACGCGATCTGCAACATCACGCTGGCCACCACCGACAACTGGCGCGACAAGGCCACC 52771 Query 33304 GGGGAAAAGAAAGAGCAGACAGAATGGCATCGCGTGGTTATCTTCGGAAAGCTGGCAGAG 33363 || |||||| ||| || |||||||| |||||||| ||||||| ||||| || ||| Sbjct 52772 GGCGAAAAGCGCGAGGCCACCGAATGGCACCGCGTGGTGTTCTTCGGCAAGCTCGCCGAG 52831 Query 33364 GTGGCTGGCGAATACCTGCGCAAAGGCTCTCAGGTGTATGTAGAAGG 33410 | || ||| | ||||||||||| ||| ||||||||||| ||||| Sbjct 52832 ATCGCCGGCCAGTACCTGCGCAAGGGCAGCCAGGTGTATGTGGAAGG 52878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152036211084276