Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_022059.1 Length=77367 Score E Sequences producing significant alignments: (Bits) Value seq4721 324 7e-84 >seq4721 Length=367317 Score = 324 bits (358), Expect = 7e-84 Identities = 573/831 (69%), Gaps = 6/831 (1%) Strand=Plus/Plus Query 67572 CCACCGGCTCGATAGCTCTGGACGCCGCTCTCGGCATCGGGGGGTATCCGAGGGGCCGGG 67631 |||||||||| | | ||| ||| || |||||||||||| || || | ||||||| Sbjct 2099 CCACCGGCTCCCTGGGTCTCGACATCG-TCTCGGCATCGGCGGCCTGCCCCGCGGCCGGG 2157 Query 67632 TAGTGGAGATCTACGGTCCTGAGTCTTCAGGGAAGTCAACGTTGTGCCTCCACGCGGTGG 67691 | ||||| ||||||||||| || || || || ||| | || | |||||| | || | Sbjct 2158 TCGTGGAAATCTACGGTCCCGAATCCTCCGGCAAGACGACCCTCACCCTCCAGGTCGTCG 2217 Query 67692 CCAATGCCCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCCGAACATTCTCTCGACC 67751 || | |||||| ||| |||| |||||||| ||||||||||||||| | || ||| Sbjct 2218 CCGAGATGCAGAAGCTCGGCGGCACCGCCGCCTTCATCGACGCCGAACACGCGCTGGACG 2277 Query 67752 CTGAGTACGCCGCGGCGCTCGGGGTGGATGTCGACAATCTCGTGGTTGTGCAGCCAGACA 67811 |||||| | ||||||||| | ||| | | ||| || | ||||| |||| Sbjct 2278 TCACCTACGCCCAGAAGCTCGGGGTCAACATCGGCGACCTCCTGATCTCCCAGCCCGACA 2337 Query 67812 CTGGCGAGCAGGCCCTGGAGATCGTTGACCTTCTCGTCAAGTCTGGCGAGGTTTCCATCA 67871 | |||||||||||||| ||||||| ||| | || || || || | || | | Sbjct 2338 CCGGCGAGCAGGCCCTCGAGATCGCCGACATGCTGGTGCGCTCCGGTGGCGTCGACGTGG 2397 Query 67872 TCGTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGCTCGAAGGGGACATCGGGG 67931 |||| | ||||| || || ||||| ||| ||| || ||||||| || || || | Sbjct 2398 TCGTGATCGACTCCGTCGCCGCCCTCACCCCGAAGGCCGAAATCGAAGGCGAGATGGGCG 2457 Query 67932 ACTCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCATGCGCAAGCTGACCGGCA 67991 || || | ||||||||| |||||||||||| |||||| |||||||||| |||| || Sbjct 2458 ACCAGCTCCCCGGCCTGCAGGCCCGCCTGATGAGCCAGGCCCTGCGCAAGCTCACCGCCA 2517 Query 67992 CGATTGCCAGCACCAACACGCTCACCCTGTGGGTGAATCAGCTGCGCGAGAAGATCGGCA 68051 || |||||||||| || | | | | || ||| | || ||||||||| Sbjct 2518 ACATCAAGCGCACCAACACCCTGGTCATCTTCATCAACCAGATCCGGATGAAGATCGG-- 2575 Query 68052 ACGTGGGCTACGGCCCGAATGAGACCACCACCGGTGGTAAGGCTCTGCGCTTCTACGCCT 68111 |||| | |||| |||||||||||||| || || || || |||||||| | Sbjct 2576 -CGTGATGTTCGGCAGCCCCGAGACCACCACCGGCGGCAACGCCCTCAAGTTCTACGCGT 2634 Query 68112 CGGTGCGTATGGATGTCCGCAGGATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCA 68171 ||||||| ||||| ||||| | |||| |||| ||| | ||| |||| ||||| Sbjct 2635 CGGTGCGGATGGACATCCGCCGCATCGGCACCATCAAGAAGAACGACGAGGTGATCGGCT 2694 Query 68172 ACCGCACGCGCGTGAAGGTTGTCAAGAACAAGCTGGCGCCTCCGCACCGCCAGGCTGAGT 68231 | || || ||||| |||||||||||| | || || ||| |||| | | || Sbjct 2695 CCGAAACCAAGGTCAAGGTCGTCAAGAACAAGGTCGCACCGCCGTTCCGCGAAACCCTGT 2754 Query 68232 TTTCCATCGTCTACGGCGAGGGCATTTCCCGCGAGGCCGAACTCCTCGACATGGCCGTTT 68291 | |||| | |||||||| |||| |||||||||| ||| || ||||| ||| ||| Sbjct 2755 TCGACATCCTGTACGGCGAAGGCACCTCCCGCGAGGGCGAGATCATCGACCTGGGCGTGC 2814 Query 68292 CCCGAGGGCTCATCAAGAAGTCTGGGGCCTGGTTCAAGTACGGGGACAAGAACATCGGCC 68351 | | || || | ||||| || ||||||| | ||||| | | |||| ||||||| Sbjct 2815 AGCACAAGTTCGTCGACAAGTCCGGCGCCTGGTACGCCTACGGCGGCGAGAAGATCGGCC 2874 Query 68352 AGGGCAAGCCCAA-GACCGTGCAGTGGCTGAAGGACAACCCGGACGTCGCC 68401 |||||||| ||| | ||| | | | || |||| ||||||| || ||||| Sbjct 2875 AGGGCAAGGACAACGCCCGCG-AATTCCTCAAGGCCAACCCGCACATCGCC 2924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 247435253877456