Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_022067.1 Length=109960 Score E Sequences producing significant alignments: (Bits) Value seq530 84.2 2e-11 >seq530 Length=195191 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 95960 TCGGTGACCACCGGCTGCAAAAGGTGGGGGATACCGTTGTATGGGGTGAGTTCCACCATC 96019 |||||||||||||| || || || |||||||| | ||| | || |||| ||| Sbjct 7063 TCGGTGACCACCGGGGCCAGCAGATGCGGGATACCTTCGTAGATCGATAGCTCCAGCATT 7004 Query 96020 TTCGGGTCGATCATGATGAGCTTGACCCGATCAGGATTGGCTCGGTAGAGCATGGAAACC 96079 ||||| |||| || || | || || || | || | ||||||||| || | Sbjct 7003 TTCGGATCGACCAGAATCAAACGTACGGCGTCCGGCTCGGATTTGTAGAGCATCGACAGG 6944 Query 96080 AGCATCGAGTTGATGAAGCTGGACTTGCCCGATCCGGTGGCGCCAGCCACCAGCAGGTGG 96139 | ||| | |||| | |||||||| || ||||||| || ||||||||||||||| Sbjct 6943 ATCATGGCATTGACGCCCACCGACTTGCCGGAACCGGTGGTCCCCGCCACCAGCAGGTGG 6884 Query 96140 GGCATTTTGGCCAG 96153 ||||||||||| || Sbjct 6883 GGCATTTTGGCGAG 6870 Score = 84.2 bits (92), Expect = 2e-11 Identities = 122/172 (71%), Gaps = 3/172 (2%) Strand=Plus/Minus Query 95678 TTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAGA 95737 |||| ||||| ||||| || | |||||||| ||| |||||||| || || | || Sbjct 7429 TTGGCCTTGATGAGGCCGGTAATCACATCCACACTGGGGCGCTGCGTGGCGAGAATCAGG 7370 Query 95738 TGAATGCCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGACTTCTTTC 95797 || || || || || || || ||||| || | || ||||| | || || | || Sbjct 7369 TGGATACCTGCAGCACGGGCTTTCTGTGCCAGACGCGCAATGAGTTCTTCCACCT---TC 7313 Query 95798 TTGTAGCCGCCCATCATGAGGTCTGCCAGCTCGTCGACCACTACCACGATGT 95849 ||| | | ||||||||||||| |||| |||||| | ||| |||||||||| Sbjct 7312 TTGCCGGCAACCATCATGAGGTCGGCCAACTCGTCAATCACCACCACGATGT 7261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351726807126317