Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_022096.1 Length=258139 Score E Sequences producing significant alignments: (Bits) Value seq4651 316 3e-81 >seq4651 Length=474197 Score = 316 bits (350), Expect = 3e-81 Identities = 387/522 (74%), Gaps = 22/522 (4%) Strand=Plus/Minus Query 35444 TTTCGGACGGGTCACACCCGTCTGGCCCTGGTATTTACCGCCGCGATCCTTGTACGAGAT 35503 |||||| | ||||| || ||||| ||| | |||||||||||||| |||||||| || | Sbjct 346546 TTTCGGCAGCGTCACGCCAGTCTGACCCAGATATTTACCGCCGCGGTCCTTGTAGGACGT 346487 Query 35504 TTCGCAGTCCTCGTCACTCTCGAAAAACAGCATCTGCGCCACACCTTCGTTCGCGTACAC 35563 |||||| |||||| |||||| ||||||||||| ||||| |||||||| ||||| | Sbjct 346486 GTCGCAGATCTCGTCGGACTCGAAGAACAGCATCTGGGCCACGCCTTCGTTGGCGTAGAT 346427 Query 35564 ACGCGCCGGCAGGTTGGTAGTGTTGCTGAACTCCAGAGTCACATGACCTTCCCACTCAGG 35623 || ||||| || |||||| ||||||||| ||||| || ||||||||||| || Sbjct 346426 CTTGGCGGGCAGCGGCGTGGTGTTGGAGAACTCCAGCGTCACGTGGCCTTCCCACTCGGG 346367 Query 35624 TTCCAGCGGCGTCACGTTGACGATGATACCACAGCGCGCGTAGGTGCTCTTACCCAAACA 35683 || || |||||||| ||||||||||| || ||||||||||||||| || |||| || Sbjct 346366 CTCGAGGGGCGTCACATTGACGATGATGCCGCAGCGCGCGTAGGTGGATTTGCCCAGGCA 346307 Query 35684 CACCACGAGGACGTTGCGCGGAATGCGGAAGTATTCGACCGTGCGTGCCAGAGCGAAGCT 35743 |||| ||| ||| ||||||| ||||||||||||||||||||||| ||||| |||||| Sbjct 346306 CACCGTGAGCACGCTGCGCGGGATGCGGAAGTATTCGACCGTGCGGGCCAGCGCGAAGGA 346247 Query 35744 GTTCGGCGGAATCAGGATGCTGTCAGCCTTAACCGG----CTGCAGGCACTTGGG---AT 35796 ||||||||| || |||| || | | |||| | || | | ||| | | Sbjct 346246 GTTCGGCGGGAT---GATG----CACACGTCGCCGGTGAAATCCACGAAGTTGCGCTCGT 346194 Query 35797 CGAAGTTCTTCGGATCAACCACTGCGCTGTTGATGTTGGTGAAGACTTCCCACTCATCGG 35856 |||||||||||||||| || | | | ||||||||||||||||| | | || | || Sbjct 346193 CGAAGTTCTTCGGATCGACGATCGTGGAGTTGATGTTGGTGAAGATCTTGAATTCGTTGG 346134 Query 35857 CAGCACGCACGTCATAACCATACGACGAGTTGCCGTACGAGA-TAACGTGCTGACCGTCG 35915 | | || ||||| || || || |||| ||||||| |||| | | ||| | || ||| Sbjct 346133 CCACGCGGACGTCGTAGCCGTAGCTCGAGGTGCCGTAGGAGACGATCTTGCCG-CCTTCG 346075 Query 35916 ATGTTGCGCACTTGCGACTCTTG---AAAGGGTTCGATCATC 35954 | | |||||| | ||| | |||||||||||||||| Sbjct 346074 TTCTGGCGCAC---CAGCTCGGGGGCAAAGGGTTCGATCATC 346036 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 825867688922280