Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_023557.1 Length=271084 Score E Sequences producing significant alignments: (Bits) Value seq888 453 2e-122 >seq888 Length=58548 Score = 453 bits (502), Expect = 2e-122 Identities = 758/1088 (70%), Gaps = 12/1088 (1%) Strand=Plus/Minus Query 71269 TACAGTACCTTTAATACCACTAAAAACGATCAGATGGCTGAACCGATGTTCCTGGGTCAG 71328 ||||| |||||| ||| | ||||| ||| | || || |||||| | || ||| Sbjct 22878 TACAGCACCTTTTCGCGCACCGACAACGACCAGCTCAAGGAGCCCATGTTCTTCGGCCAG 22819 Query 71329 TCGGTTAACGTCTCACGTTATGATCAGCAGAAGTACCCCGCGTTCGAAAAGCTGATTGAG 71388 |||| ||||| |||| || || ||||||||||||||| ||||| |||||||| || Sbjct 22818 CCGGTGAACGTGGCACGCTACGACCAGCAGAAGTACCCCATCTTCGAGAAGCTGATCGAA 22759 Query 71389 AAACAACTTTCATTCTTCTGGCGACCTGAAGAGGTGGATGTTTCGCAAGACCGTATCGAC 71448 || || || || ||||||||||| || ||||| || || | |||| ||||| |||| Sbjct 22758 AAGCAGCTCTCCTTCTTCTGGCGCCCGGAAGAAGTAGACATCACGCAGGACCGGCTCGAT 22699 Query 71449 TTCCAGGGGTTGCCAGATCATGAAAAACACATCTTCGTTTCTAACCTGAAATACCAAACC 71508 | |||| |||| || || || || ||||||||| | |||||||||||||| || Sbjct 22698 TACCAGAACCTGCCGGACCACGAGAAGCACATCTTCATCAGCAACCTGAAATACCAGACG 22639 Query 71509 CTGCTGGACTCGATTCAGGGTCGTAGCCCGAACGTGGCCTTGCTGCCGATCTGTTCTATC 71568 ||||||||||| || ||||| || || || ||| |||| || |||||| | || | Sbjct 22638 CTGCTGGACTCCATCCAGGGGCGCAGTCCCAACATGGCGTTCCTGCCGCTGGTGTCGCTG 22579 Query 71569 CCGGAACTCGAAACCTGGATTGAAACCTGGGCGTTCTCTGAAACGATTCACTCGCGCTCA 71628 || || || || || ||||| || ||||||||||| || |||||||| ||||||||||| Sbjct 22578 CCCGAGCTGGAGACGTGGATCGAGACCTGGGCGTTTTCCGAAACGATCCACTCGCGCTCG 22519 Query 71629 TACACCCACATCATCCGTAATATCTTTACTGACCCCTCCATCGTGTTTGATGACATCGTG 71688 ||||||||||||||||| || ||| | | |||||||| | ||||| || ||||||||| Sbjct 22518 TACACCCACATCATCCGCAACATCGTCAACGACCCCTCTGTTGTGTTCGACGACATCGTG 22459 Query 71689 ACCAACGAACACATCAAAGCGCGTGCTGAGTCCGTCACGGAGTATTACGACCAGCTGATC 71748 |||||| || ||||| |||||| | | | | |||||||||| | |||||| Sbjct 22458 CGCAACGAGCAGATCAAGCTGCGTGCGACGGACATTTCCTCGTATTACGACGACCTGATC 22399 Query 71749 GAAATGACCA---TGTAC-CTCAACTTACTGGGTGAAGGTACTCATGTAATCAATGGTAA 71804 | ||| ||||| | || ||||| | || || ||||| || | Sbjct 22398 CACGACGCCATGCTGTACGCGCA----GCTGGGCGCCGGGCGGCACACCATCAACGGCCA 22343 Query 71805 GAAAGTCGTGGTCTCGATGCGTGCTATCAAGCGTCTGGTCTACCTGTGCATCGTGTCGGT 71864 || || || || | ||| | | ||||||||| | || || Sbjct 22342 CGTGCACGAAATCAACGTGTATGAGCTGAAGAAGAAGATGTACCTGTGCCTGATGAACGT 22283 Query 71865 CAACGTGTTGGAAGCCATCCGCTTCTATGTCTCGTTTGCCTGCTCGTTTGCCTTTGCTGA 71924 ||| | | || || ||||||||||| || || || |||||||| ||||| || || Sbjct 22282 GAACATCCTTGAGGCGATCCGCTTCTACGTGAGCTTCGCGTGCTCGTTCGCCTTCGCCGA 22223 Query 71925 ACGCGAGCTGATGGAAGGCAACGCCAAGATCATTAAACTGATCGCCCGTGATGAAGCCCT 71984 ||| |||| ||||||||||||||||||||||| || ||||| ||||| || || || Sbjct 22222 GCGCAAGCTCATGGAAGGCAACGCCAAGATCATCCGCCTCATCGCGCGTGACGAGGCGCT 22163 Query 71985 GCATCTGACCGGCACCCAGCACATGATCATGTTAATGAAGTCCGGTGCTGACGATGCTGA 72044 ||| || ||||| || |||||| || | | | ||| ||||| ||||| | || Sbjct 22162 GCACCTTACCGGTACGCAGCACTTGCTGAATATCATGCGTTCCGGGCAGGACGACCCCGA 22103 Query 72045 GATGGCGGAAATCGTTAAAGAGTGTGAAGCA-GAAACATACGCACTCTTTAAGGACGCTG 72103 | | || |||| | ||||| | |||| || | ||| | || ||| |||| | Sbjct 22102 GTTCGCCCTCATCGCGCAGGAGTGCG-AGCACGAGTGCTTCGCGATGTTCAAGAACGCGG 22044 Query 72104 CAGAGCAGGAGAAAGACTGGGCGAACTATCTATTCCAGGACGGGTCGATGATCGGTCTGA 72163 | |||||| || | |||||| ||||| | |||| || || || |||||||| |||| Sbjct 22043 CGCTGCAGGAAAAGCAGTGGGCGGACTATTTGTTCCGCGATGGCTCCATGATCGGCCTGA 21984 Query 72164 ACAAAGAGATCGTGTGCCAGTACATCGAATACATCACCAACATCCGTATTCGCGCCATCG 72223 |||| || ||| || |||||||| |||| ||||||||||| ||||| || |||| | | Sbjct 21983 ACAAGGACATCCTGAGCCAGTACGTCGAGTACATCACCAATATCCGCATGACCGCCGT-G 21925 Query 72224 GTTACGATGACATC-TACGCCGGTGTCAAAGCTAACCCAATCCCATGGATCAACTCCTGG 72282 | || | | | | || | |||| ||||| || || ||||||||| | ||| Sbjct 21924 GGGCTGAAGCCCGCGTTCGAGCGCATCAAGAACAACCCGATTCCGTGGATCAACACGTGG 21865 Query 72283 TTGGTTTCTGACAACGTGCAAGTCGCTCCACAGGAAGTGGAAGTAAGTTCTTATCTGGTC 72342 ||| || |||| ||||| || ||||| |||||||| ||| | || || ||||| ||| Sbjct 21864 TTGTCCTCGGACACGGTGCAGGTGGCTCCGCAGGAAGTCGAATTGAGCTCCTATCTCGTC 21805 Query 72343 GGTCAGAT 72350 || ||||| Sbjct 21804 GGCCAGAT 21797 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 867289225747680