Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq877 84.2 3e-11 >seq877 Length=4402401 Score = 84.2 bits (92), Expect = 3e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 23054 TCATGGGGATGAATATAATTTTGATGGTCCAGGTCAAATTTTAGCTCATGCtttttttCC 23113 ||| || |||| ||| || |||||||| || || ||||| | || ||||| || | ||| Sbjct 1762634 TCACGGCGATGGATACAAATTTGATGGCCCGGGAAAAATTCTGGCCCATGCCTTCTATCC 1762575 Query 23114 TGGTACTGGAAGAGGAGGAGATGCTCATTTTGATTTAGAAGAAA 23157 ||| ||||| | ||||| || |||||||||||| |||||||| Sbjct 1762574 TGGCACTGGCATTGGAGGTGACGCTCATTTTGATGAAGAAGAAA 1762531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635139830751960