Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq4284 95.1 3e-14 >seq4284 Length=891408 Score = 95.1 bits (104), Expect = 3e-14 Identities = 206/302 (68%), Gaps = 10/302 (3%) Strand=Plus/Plus Query 131879 GTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTATCTTTTGGCTTAAGAAGCGTGGA 131938 || |||||||| |||||| || |||| | ||||||||| | |||||||||||| Sbjct 85238 GTGGAAGGTATTTTCTTTAGTGGAAGTTTCGCATCCATCTTTTGGTTGAAGAAGCGTGGA 85297 Query 131939 TTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCGAGAGATGAAGCATTGCATACT 131998 |||||||||| || |||| ||||| |||| ||||| | || |||| |||| || Sbjct 85298 CTGATGCCTGGGCTAACATTCTCCAACGAATTGATCTCACGTGACGAAGGCCTGCACACG 85357 Query 131999 GAATTTGCTATATTAATCTATAGAAAATTTGCT-GATAAACTTGATGAAAATAA--TATT 132055 || |||||| | || | | || || || | | |||| || | || || | | Sbjct 85358 GACTTTGCTTGTCTTATGT-TCAAATATCTGGTACAGAAAC--CATCACAAGAACGTGTG 85414 Query 132056 AAACAACTTATAAGCGAAGCAGTTGATATCGAGAAGGAGTTTATTACAGAAGCTTTGCC- 132114 | | |||| |||||||||| ||||| ||||||| | || |||| | || Sbjct 85415 ATCGAGATTATCCGCGAAGCAGTCCTGATCGAACAGGAGTTCCTGACGAAAGCCCTTCCG 85474 Query 132115 -TTGCAATTTGATTGGGATGAATGCTGACTCTATGAAGGAGTACATTGAATTCGTTGCTG 132173 ||| | || |||| |||||| |||| |||| | |||| ||||||||||| |||| Sbjct 85475 GTTG--ACCTGCTTGGCATGAATTGTGACCTTATGTCGCAGTATATTGAATTCGTGGCTG 85532 Query 132174 AT 132175 || Sbjct 85533 AT 85534 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186740464872477