Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq986 100 7e-16 seq251 96.9 8e-15 seq100 96.9 8e-15 >seq986 Length=4314454 Score = 100 bits (110), Expect = 7e-16 Identities = 133/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || || || |||||| |||| || || ||| ||||| |||| || ||| Sbjct 1407828 ACTGGCAAGACCATCACTCTGGAGGTCGAGCCTTCGGACACCATCGAGAACGTTAAGGCC 1407887 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 |||||||| || || ||||| || || || || | || ||||| ||||| ||| Sbjct 1407888 AAGATTCAGGACAAGGAAGGCATCCCACCAGATCAGCAGCGTCTGATCTTTGCCGGTAAG 1407947 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 ||| | || ||||| | |||||| ||||||||||| |||||||||| ||||| ||||| Sbjct 1407948 CAGCTCGAGGATGGTCGTACTTTGTCCGATTACAACATCCAGAAAGAATCTACCCTTCAT 1408007 Query 206374 CTTGT 206378 || || Sbjct 1408008 CTGGT 1408012 Score = 91.5 bits (100), Expect = 3e-13 Identities = 131/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || || || |||||| |||| || || ||| |||||| ||||| || ||| Sbjct 1407372 ACTGGCAAGACCATCACTCTGGAGGTCGAGCCTTCGGACACAATCGAAAACGTTAAGGCC 1407431 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| || || || ||||| || || || || | || ||||| ||||| ||| Sbjct 1407432 AAGATCCAGGACAAGGAAGGCATCCCTCCAGATCAACAGCGTCTGATCTTTGCCGGTAAG 1407491 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 ||| | || ||||| | ||| || | || |||||| ||||||| || ||||||||||| Sbjct 1407492 CAGCTCGAGGATGGTCGTACTCTGTCAGACTACAACATCCAGAAGGAATCTACTCTTCAT 1407551 Query 206374 CTTGT 206378 || || Sbjct 1407552 CTGGT 1407556 >seq251 Length=2698768 Score = 96.9 bits (106), Expect = 8e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || |||||| || || || || || ||||| ||||| || ||| || ||| Sbjct 661582 CAGATTTTCGTCAAAACCCTAACCGGTAAGACCATCACCTTGGAGGTCGAACCCTCGGAC 661641 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||| || || || || ||||| ||||| || Sbjct 661642 ACGATCGAGAATGTGAAGGCCAAGATCCAGGATAAGGAGGGAATCCCCCCGGATCAGCAG 661701 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | | ||||||||||| |||||| |||| ||||| | || || | ||||||||| || Sbjct 661702 CGTTTGATCTTCGCCGGTAAGCAGCTGGAGGATGGCCGTACCCTGTCGGATTACAACATC 661761 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||| ||| ||| ||||| || ||| || | || || Sbjct 661762 CAGAAGGAGAGTACCCTTCATCTGGTTCTGCGTCTCCG 661799 Score = 96.9 bits (106), Expect = 8e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || || || ||||| || |||||| | ||||| || |||||| Sbjct 662722 CAGATCTTCGTCAAGACTCTGACTGGAAAGACCATCACTCTTGAAGTCGAGCCATCTGAC 662781 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | ||| || ||| ||||| || || || |||||||| || || || Sbjct 662782 ACCATTGAAAACGTCAAGGCTAAGATCCAGGATAAGGAAGGAATCCCCCCAGATCAGCAG 662841 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | | ||||||||||| |||||| |||||||||| | ||| | |||| ||||| || Sbjct 662842 CGTTTGATCTTCGCCGGTAAGCAGCTGGAAGATGGTCGTACTCTTTCCGACTACAATATC 662901 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||| ||| |||||||| || ||| || | || || Sbjct 662902 CAGAAGGAGAGCACTCTTCATCTGGTTCTGCGTCTCCG 662939 Score = 91.5 bits (100), Expect = 3e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || || || ||||| || ||||| |||||||| || || ||| Sbjct 663634 CAGATCTTCGTCAAGACTCTGACTGGAAAGACCATCACCTTGGAAGTCGAGCCATCAGAC 663693 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || ||||| || ||| || || ||||| || ||||| || || || || Sbjct 663694 ACCATCGAAAATGTTAAGGCTAAAATCCAAGATAAGGAAGGTATCCCTCCAGATCAGCAG 663753 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | | ||||||||||| ||||| |||||||||| | ||| || | || ||||| || Sbjct 663754 CGTTTGATCTTCGCCGGTAAGCAACTGGAAGATGGCCGCACTCTGTCGGACTACAATATC 663813 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||| || |||||||| || ||| || | ||||| Sbjct 663814 CAGAAGGAAAGCACTCTTCATCTGGTTCTGCGTCTTCG 663851 Score = 91.5 bits (100), Expect = 3e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || || || || || || ||||| | ||||| || || ||| Sbjct 663862 CAGATCTTCGTCAAGACTCTGACTGGTAAGACCATCACACTTGAAGTCGAGCCATCCGAC 663921 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| |||||| ||||| || || || |||||||| || || || Sbjct 663922 ACTATCGAGAATGTAAAGGCTAAGATCCAGGATAAGGAAGGAATCCCCCCAGATCAGCAG 663981 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | | ||||||||||| |||||| |||||||||| | ||| | |||| ||||| || Sbjct 663982 CGTTTGATCTTCGCCGGTAAGCAGCTGGAAGATGGTCGTACTCTTTCCGACTACAATATC 664041 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||| ||| |||||||| || ||| || | ||||| Sbjct 664042 CAGAAGGAGAGCACTCTTCATCTGGTTCTGCGTCTTCG 664079 Score = 87.8 bits (96), Expect = 4e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || ||||| || ||||| ||||| || || || || || | ||| Sbjct 662050 AAGACTCTGACTGGAAAGACCATCACCTTGGAGGTTGAGCCATCCGATACTATTGAAAAT 662109 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || || ||||| || ||| || || | | |||||| Sbjct 662110 GTCAAGGCCAAGATCCAGGATAAGGAAGGTATCCCGCCAGATCAGCAGCGTTTGATCTTC 662169 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| |||||| |||||||||| | || || | ||||||||| ||||||| ||| | Sbjct 662170 GCCGGTAAGCAGCTGGAAGATGGTCGTACCCTGTCGGATTACAACATCCAGAAGGAGAGT 662229 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 || ||||| || ||| || | || || Sbjct 662230 ACCCTTCATCTGGTTCTGCGTCTCCG 662255 Score = 87.8 bits (96), Expect = 4e-12 Identities = 132/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || || || || || || ||||| ||||||| || || ||| Sbjct 664546 CAGATCTTCGTCAAGACTCTGACCGGTAAGACCATCACCCTGGAAGTTGAGCCATCCGAC 664605 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| |||||| ||||| ||||| || |||||||| || || || Sbjct 664606 ACTATCGAGAATGTAAAGGCTAAGATCCAAGATAAGGAAGGAATCCCTCCAGATCAGCAG 664665 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | ||||||||||| |||||| |||||||||| | || | |||| |||||| | Sbjct 664666 CGATTGATCTTCGCCGGTAAGCAGCTGGAAGATGGCCGTACCCTTTCCGACTACAACATT 664725 Query 206353 CAGAAAGA 206360 |||||||| Sbjct 664726 CAGAAAGA 664733 >seq100 Length=1779872 Score = 96.9 bits (106), Expect = 8e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || || || || || || ||||| | || || || || ||| Sbjct 1410257 CAGATCTTCGTCAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTCGAGCCATCGGAC 1410316 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || ||||| || ||| ||||| || || || ||||||||| || || || Sbjct 1410317 ACGATCGAAAATGTGAAGGCCAAGATCCAGGACAAGGAAGGAATTCCCCCAGATCAGCAG 1410376 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | | |||||||||||||||||| |||||||||| | || || |||| |||||| || Sbjct 1410377 CGTTTGATCTTCGCCGGAAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTACAACATC 1410436 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||| || || ||||| || || || || | ||||| Sbjct 1410437 CAGAAGGAATCCACTCTCCATCTGGTGCTGCGTCTTCG 1410474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181748769130197