Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_025424.1 Length=45648 Score E Sequences producing significant alignments: (Bits) Value seq818 91.5 4e-14 >seq818 Length=58372 Score = 91.5 bits (100), Expect = 4e-14 Identities = 130/182 (71%), Gaps = 6/182 (3%) Strand=Plus/Plus Query 24515 CCGGTCAAATATTATAGCAAAGAAGGATTTGTAGAACGAAAAATAGAGATTAACGAAGAA 24574 || || ||||| |||| | ||||||||||| || || ||||||||| || |||| | Sbjct 7369 CCTGTTAAATACTATAAAGACGAAGGATTTGTTGAGCGCAAAATAGAGCTTGACGATAAT 7428 Query 24575 GATTTACAGAAAATCATTGAAGATTATTTA---GATAGGCATGCAGACTTTGATTTTGAT 24631 ||| | || |||| ||| | || | || |||| |||| || ||||| ||||| Sbjct 7429 GATCTCCAAGAAATTATTCAGGACTGGCTAATTGATA---ATGCCGATTTTGAATTTGAC 7485 Query 24632 GAACTTGAGGTTGTAAATAACCGTCCTATGAATATTTGGTTATACGCAAAGTGTAGAAAG 24691 ||| | || ||||| ||| || ||||||||||| ||| | |||| ||||| | ||| Sbjct 7486 GAAGTGGAAGTTGTTAATCTGCGGCCTATGAATATCTGGCTTCACGCCAAGTGCCGCAAG 7545 Query 24692 TA 24693 || Sbjct 7546 TA 7547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145943755262740