Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_025425.1 Length=163424 Score E Sequences producing significant alignments: (Bits) Value seq888 158 1e-33 >seq888 Length=58548 Score = 158 bits (174), Expect = 1e-33 Identities = 284/410 (69%), Gaps = 4/410 (1%) Strand=Plus/Plus Query 135360 ATTAATCTGTACGCCGTAGTCAAGATGGCGAATGCGGTTATCTTCCACGCCCTTATTGTT 135419 ||| ||||| || || ||||| | ||||||||||||||| || ||||| || ||||| Sbjct 24157 ATTGATCTGCACACCATAGTCCAAATGGCGAATGCGGTTTTCCTCCACACCGCGGTTGTT 24216 Query 135420 CTTTAACACAATCAGACTTTCAAACTCTAAATGCCACATTGGGTAATAGAGAGTCGCCGC 135479 ||| | ||| | ||| ||| | || | ||||||| ||||| | || || ||||| Sbjct 24217 CTTGAGCACCAGCAGCGATTCCACTTCCAGGTGCCACAGGGGGTAGAACAGCGTGGCCGC 24276 Query 135480 CCCGCCACGAATACCGCCTTGTGAGCATGACTTAACGGCAGTCTGAAAATGTTTCCAGAA 135539 ||| || || | |||||| || ||||| ||||| ||||||| ||| || || |||| Sbjct 24277 CCCTCCCCGCACACCGCCCTGCGAGCAGGACTTGACGGCAGCCTGGAACATCTTGAAGAA 24336 Query 135540 TGGGATAACGCCAGTATGACGAACTTCACCATGCCCGATCTTAGAT-CCTTCCGCGCGAA 135598 || | ||| || || | |||| || || ||| || | | || | || || | Sbjct 24337 GGGCAGGCAGCCCGTGTGCTGCGCTTCGCCGCCCCGGAT-TTCGCTGCCCACGGCACGGA 24395 Query 135599 TCATGCCAGCGTTGATACCGATACCCGCACGCTTGCTA-ATATACTTGATGATTGCATTT 135657 | ||| | ||||| ||||| || || ||| ||| | | ||||||| ||| || | Sbjct 24396 TACGGCCGCCATTGATGCCGATGCCAGCGCGC-TGCGACACGTACTTGACGATGGCGCTG 24454 Query 135658 GCTGTTTCGTTGATGCCCTGCAATGAGTCATCACTTTCAATCACCACACACGAACTAAAT 135717 | || |||||||||| | || ||| || | ||| |||| ||| ||||| || || Sbjct 24455 GTGGTGGCGTTGATGCCATCCAGGCTGTCGTCGCATTCGATCAGCACGCACGAGCTGAAC 24514 Query 135718 TGGCGTGTTGGGGTACGCACACCAGCCATAATCGGAGTAGGCAGAGAGAT 135767 ||||| | || || ||||| || | |||||| || |||||||| || || Sbjct 24515 TGGCGCATGGGCGTGCGCACGCCGGACATAATGGGGGTAGGCAGCGAAAT 24564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 522797711292480