Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_025429.1 Length=156446 Score E Sequences producing significant alignments: (Bits) Value seq4651 168 7e-37 seq4037 95.1 1e-14 >seq4651 Length=474197 Score = 168 bits (186), Expect = 7e-37 Identities = 337/497 (68%), Gaps = 32/497 (6%) Strand=Plus/Minus Query 142241 TCTTCGGTCATCAGATGCGTTTCAATCTGGCTCAAGGCTTTCCTCTTCTCTCCACGAAGA 142300 ||||||| |||||||| ||| |||| || | || ||||| || ||| |||| |||| Sbjct 350247 TCTTCGGCTGGCAGATGCGCTTCGATCTCGCCGACGGTTTTCCGCTGCTCACCACCAAGA 350188 Query 142301 AGCTGCATCTGAAGTCGATCATCGTCGAACTCCTGTGGTTCCTCAAAGGCGATACGAACA 142360 |||| || ||||||||| ||| || ||||||||||| ||||| || |||| Sbjct 350187 AGCTCCACACCCGCTCGATCATCCACGAGCTGCTGTGGTTCCTGCGCGGCGACACCAACA 350128 Query 142361 TCAAGTATCTTCACGATCACAACGTCAAGATCTGGGATGAATGGGCTGATGCCAATGGCA 142420 || |||||| | || |||| || ||||||||| || ||||| || | || ||| Sbjct 350127 TCCGGTATCTCAAGGACAACAAGGTTTCGATCTGGGACGAGTGGGCCGACGAGAACGGCG 350068 Query 142421 ACCTCGGACCTGTCTACGGCAAGCAGTGGATGTCCTGGACGAACCTCGTTGTCGCTGGAG 142480 | || || || || ||||||||||||||| | |||||| | Sbjct 350067 AGCTGGGCCCGGTGTACGGCAAGCAGTGG--------------------CGCCGCTGG-G 350029 Query 142481 ATGACGTC--ACAGACGAACCGATCGATCAGATCCGCCGGATCATTACTGACTTGAAGAA 142538 | ||| | || | || | | ||||| |||||| ||| | |||| | | ||||| Sbjct 350028 A-AACGCCCGACGGGCGCAGC-ATCGACCAGATCGGCCAGCTCATCGAGGCGCTCAAGAA 349971 Query 142539 GTCTCCTCATTCTCGTCGTCACATCGTCACCGCGTGGAACCCTGCTGAAGTCGACGACAT 142598 | || | || || || |||||||| | || |||||||| || || || ||| ||| Sbjct 349970 GAACCCGGACTCCCGCCGCCACATCGTGTCGGCCTGGAACCCGGCCGACGTGGACCGCAT 349911 Query 142599 GGCACTTCCTCCGTGTCACATGATGTTCCAATTCCACGTCGACTCGAAG--AAGCGTCTG 142656 ||| || || || || ||| | ||||||| ||| |||| | ||| | ||| ||| Sbjct 349910 GGCCCTGCCGCCCTGCCACGCGCTGTTCCAGTTCTACGTGG--CCGACGGCAAG---CTG 349856 Query 142657 TCATGCCAGCTGTATCAGCGTTCGGCAGACTGGTTCCTCGGCGTTCCGTTCAACATTGCT 142716 || |||||||| |||||||| || ||| ||||| |||||||| |||||||| || Sbjct 349855 TCGTGCCAGCTCTATCAGCGCAGCGCCGACATCTTCCTGGGCGTTCCCTTCAACATCGCC 349796 Query 142717 TCGTACGCGCTTCTCAC 142733 |||||||| |||| Sbjct 349795 AGCTACGCGCTCTTCAC 349779 >seq4037 Length=4543 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 142243 TTCGGTCATCAGATGCGTTTCAATCTGGCTCAAGGCTTTCCTCTTCTCTCCACGAAGAAG 142302 ||||| | |||||||| ||| | ||| | |||||||| || | |||| |||||| Sbjct 4139 TTCGGCTACCAGATGCGCTTCGACCTGAACGAGGGCTTTCCGCTGGTGACCACCAAGAAG 4198 Query 142303 CTGCATCTGAAGTCGATCATCGTCGAACTCCTGTGGTTCCTCAAAGGCGATACGAACATC 142362 |||| |||||||| ||||||||||| || ||||||||||| | || | ||| | Sbjct 4199 GTGCACCTGAAGTCCATCATCGTCGAGCTGCTGTGGTTCCTTACCGGTTCCAGCGACAAC 4258 Query 142363 AAGTATCTTCACGATCACAACGTCAAGATCTGGGATGAATGGGCTGATGCCAATGGCAAC 142422 || | || | || | | ||| | ||||||||| || ||||| | | |||| | Sbjct 4259 AACTGGCTGAAGGAACGCGGCGTGACGATCTGGGACGAGTGGGCGCGCGAAGACGGCAGC 4318 Query 142423 CTCGGACCTGTCTACGGCAAGCAGTGG 142449 | || || ||||||||| ||||||| Sbjct 4319 TTGGGCCCCGTCTACGGCGTGCAGTGG 4345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500469439066320