Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_025430.1 Length=42351 Score E Sequences producing significant alignments: (Bits) Value seq476 140 9e-29 seq818 107 5e-19 >seq476 Length=182463 Score = 140 bits (154), Expect = 9e-29 Identities = 121/150 (81%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 235 GATTTCAGTTGTGTAGCGATCAACGCCAGCCTGGTCCTGCCACTTGCGCGTTTGCAGCGC 294 |||||| || ||||| || || ||| ||| ||||||||||||||| || |||| | Sbjct 52939 GATTTCGGTGGTGTAACGGTCCTGGCCGTCCTTGTCCTGCCACTTGCGGGTGCGCAGGGA 52880 Query 295 GCCTTCAATGAACACCTTGCTGCCTTTGCGCAGGTACTGGCTGGCGATTTCTGCCAGCTT 354 |||||| | |||||| |||||| |||||||||||||||| |||||| || || ||||| Sbjct 52879 GCCTTCCACATACACCTGGCTGCCCTTGCGCAGGTACTGGCCGGCGATCTCGGCGAGCTT 52820 Query 355 TCCGAAGATGACCACGCGGTGCCATTCCGT 384 ||||||| ||||||||||||||||| || Sbjct 52819 GCCGAAGAACACCACGCGGTGCCATTCGGT 52790 >seq818 Length=58372 Score = 107 bits (118), Expect = 5e-19 Identities = 176/251 (70%), Gaps = 2/251 (1%) Strand=Plus/Minus Query 257 ACGCCAGCCTGGTCCTGCCACTTGCGCGTTTGCAGCGCGCCTTCAATGAACACCT-TGCT 315 ||||| || | ||||||||| || || || ||| | ||||| ||| | |||| || | Sbjct 56260 ACGCCTGCATCGTCCTGCCAGTTCCGGGTACGCAACTGCCCTTCGATGTAAACCTGTGAT 56201 Query 316 GCCTTTGCGCAGGTACTGGCTGGCGATTTCTGCCAGCTTTCCGAAGATGACCACGCGGTG 375 |||| | || |||| | ||||||||| || || || ||||| | |||||| || || Sbjct 56200 CCCTTCTGG-AGATACTCTCCGGCGATTTCCGCGAGTTTCCCGAACAAGACCACACGATG 56142 Query 376 CCATTCCGTTTTTTCTTTCTTCTCCCCTGTCTGCTTATCCTTCCAGGTTTCAGACGTGGC 435 ||||||||| |||||| ||| ||| || ||||| || || ||| |||||||| || || Sbjct 56141 CCATTCCGTGTTTTCTCTCTGCTCACCGGTCTGTTTGTCACGCCATGTTTCAGAGGTTGC 56082 Query 436 AATTGATAACTGCGCCACGCCGTTGCCGTTCGGCAGCGTGCGGAATTCTGGATCGTTGCC 495 | | || | || || || ||| ||||||| || | || ||| | | || Sbjct 56081 CAGCGTCAAATTGGCTACCGCGCCGCCATTCGGCATATAACGCACCTCGGGAGCCTGCCC 56022 Query 496 TAAGTTGCCAA 506 |||||||||| Sbjct 56021 CAAGTTGCCAA 56011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135393951248242