Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_025963.1 Length=139981 Score E Sequences producing significant alignments: (Bits) Value seq1821 122 8e-23 seq154 114 1e-20 >seq1821 Length=1685694 Score = 122 bits (134), Expect = 8e-23 Identities = 199/280 (71%), Gaps = 10/280 (4%) Strand=Plus/Plus Query 5340 CTCGCAGATGAGCTGCGCCACGCGGTCGCCTCGCCGCACCACGAAGGTCTC-TTGGCCGA 5398 ||||||||||| |||||| | ||| || || || |||| ||| ||| ||| |||| Sbjct 770441 CTCGCAGATGAACTGCGCAATGCGATCCCCCCGGGCCACCTTGAA---CTCGTTGTCCGA 770497 Query 5399 --AGTTGAAGAGCACCACTCCCAGGTTCCCTCGGAAGTCCGGGTCCACGACGCCCGCTCC 5456 |||||| || ||||| |||||||| || ||| ||||| |||||| || || || || Sbjct 770498 GTGGTTGAATAGGACCACACCCAGGTTGCCCCGGTAGTCCTCGTCCACAACTCCGGCGCC 770557 Query 5457 CACATCCACGAAGTTGTTTACCGCGAGACCGGACCTCGGCGCCACGCGACCGTAGCAGCC 5516 |||||| | |||||| || || || || ||||| | || || || || |||||||| || Sbjct 770558 CACATCGATGAAGTTTTTGACGGCCAGTCCGGATCGGGGAGCAACTCGGCCGTAGCACCC 770617 Query 5517 GTATGGCGGGTGGATCTGCAGATCGGTCAGCA-CTACCGCGCGCCCCATCGGC-GGCAAG 5574 | || | || | ||| | ||||||| || | || || ||||| ||| || | Sbjct 770618 TTCCGGAAGTTGCACCTGGATGTCGGTCATCACCAACTGCTTGCCCC--GGGCAGGAACC 770675 Query 5575 GTGTAGTCGTAAGCGCTGTACAGGTCGTAGCCGGCCGCCT 5614 ||||| ||||| || || | || || | ||||| |||| Sbjct 770676 GTGTACTCGTACGCACTTTTGAGATCAAATCCGGCGGCCT 770715 >seq154 Length=645030 Score = 114 bits (126), Expect = 1e-20 Identities = 184/258 (71%), Gaps = 10/258 (4%) Strand=Plus/Minus Query 5340 CTCGCAGATGAGCTGCGCCACGCGGTCGCCTCGCCGCACCACGAAGGTCTC-TTGGCCGA 5398 ||||||||||| |||||| | ||| || || || |||| ||| ||| ||| |||| Sbjct 217326 CTCGCAGATGAACTGCGCAATGCGATCCCCCCGGGCCACCTTGAA---CTCGTTGTCCGA 217270 Query 5399 --AGTTGAAGAGCACCACTCCCAGGTTCCCTCGGAAGTCCGGGTCCACGACGCCCGCTCC 5456 |||||| || ||||| |||||||| || ||| ||||| |||||| || || || || Sbjct 217269 GTGGTTGAATAGGACCACACCCAGGTTACCCCGGTAGTCCTCGTCCACAACTCCGGCGCC 217210 Query 5457 CACATCCACGAAGTTGTTTACCGCGAGACCGGACCTCGGCGCCACGCGACCGTAGCAGCC 5516 |||||| | |||||| || || || || ||||| | || || || || || ||||| || Sbjct 217209 CACATCGATGAAGTTCTTCACGGCCAGTCCGGATCGGGGAGCAACCCGGCCATAGCACCC 217150 Query 5517 GTATGGCGGGTGGATCTGCAGATCGGTCAGCA-CTACCGCGCGCCCCATCGGC-GGCAAG 5574 | || | || | ||| | ||||||| || | || || ||||| ||| || | Sbjct 217149 TTCCGGAAGTTGCACCTGGATGTCGGTCATCACCAACTGCTTGCCCC--GGGCAGGAACC 217092 Query 5575 GTGTAGTCGTAAGCGCTG 5592 ||||| ||||| || ||| Sbjct 217091 GTGTACTCGTACGCACTG 217074 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447784572026520