Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq4280 122 8e-23 >seq4280 Length=912600 Score = 122 bits (134), Expect = 8e-23 Identities = 477/738 (65%), Gaps = 18/738 (2%) Strand=Plus/Minus Query 136986 TACTTGATATTCGCCCGATAGCACTCTGCGTACGTACAGATTACTAGTGAACGGCTCGAA 137045 ||| || |||| || || ||||||| || ||| | || |||| |||| ||||| Sbjct 357407 TACCTGGAATTCTCCGGACAGCACTCGTCGGTTGTAAACGTTGGAAGTGTACGGTTCGAA 357348 Query 137046 CGATTCGTTGTTACCCAAAATCTGTGCAGTCGTCGCTGTCGGCATGTAAGCGATCAACAA 137105 ||||||||||| || | ||| || || |||| || || ||||| ||| | | || Sbjct 357347 TGATTCGTTGTTTCCAAGAATTTGCGCCGTCGAAGCCGTGGGCATCGGAGCCAGAAGCAG 357288 Query 137106 TGAATTCCGTAAACCGTGTACGGCCAATTGTTGCTTGAGCTCTTTCCAGTTCCACAGATT 137165 ||||| || | || || ||| | | || ||| | | ||| | ||||| | Sbjct 357287 GGAATTGCGAACGCCATGCTTGGCGATCTTTTCCTTCAAGGCAGCCCAATCCCACA---T 357231 Query 137166 GTTCGATTGGGT-TATATTCCACAAATCAAACTGCAAAAGTCCGCGACTTGCAGGACTTT 137224 | || |||| | | | ||||||| ||| |||||| || ||| || | |||| | Sbjct 357230 G-TCTGTTGGCTCTTTGTTCCACATATCGTACTGCAGAACTCCCTTGCTCACCGGACATC 357172 Query 137225 CTGCATAAGAATCATATGTTCCGTGCAGTTTCGCCAGTTCAATACTCTGGACTAGTGCGC 137284 | | ||| | || || || || | | || |||| |||| || ||| || | Sbjct 357171 CCGGATAGGTTTCGTAGGTACCCTCCTTTTCGGCCAATTCACAGCTTGCTTCTAAGGCAC 357112 Query 137285 CATAGTAAATAGTTTCGGAGATTTTTCTATTCAATTCTCTAGCTTCTTGGCTGTCGTAGG 137344 ||||||| ||||||||| |||||| ||||| || | |||||||| ||||||||| | Sbjct 357111 CATAGTAGATAGTTTCGAAGATTTGCTGATTCAGTTTTTGAGCTTCTTCGCTGTCGTAAG 357052 Query 137345 GCATATC-CAATATAGCGAAAGCATCTGCAAGTCCTTGAATACCGATACCGATAGGTCTG 137403 | ||| | || | | ||| ||||| || | ||| || | |||||| ||||| || | | Sbjct 357051 G-ATAACGCATCAAAATGAAGGCATCGGCCATTCCCTGGACACCGATTCCGATCGGGCGG 356993 Query 137404 TGTTTAAAATTTGAT-ATTTGAGCGCTAACAAGCGGATAAAAGTTTGCGTCTATAATTCT 137462 || | ||| ||| ||| | || | | ||||| || || ||| || ||| | Sbjct 356992 TGGCGCATATTGGATCGCTTGGCCTCTGGC-ACTGGATAGAAATTAATGTCGATGATTTT 356934 Query 137463 ATTGAGATTGTTAGTAACGACTCTGGACACTTTGTAGAGCAATTCGAAATCGAAGCTTTT 137522 |||||||| ||||| | | | | | |||| | || || |||||| | | || Sbjct 356933 GTTGAGATTCTTAGTGGCAATTTTTGCTACTTCTTTCAGTTTTTGGAAATCATATGTCTT 356874 Query 137523 AGACTGTTTGTTAGCAAAATTATTGACGGCAATAGAGGCTAAGTTGCATACGGCCGTTTC 137582 | | | | || | || | || | || || || |||| ||| || || || |||| Sbjct 356873 -GTCGGGT--TTCACGAACATGTTCAATGCGATGGACGCTAGGTTACAAACAGCAATTTC 356817 Query 137583 TGTATTGTCGCTGTATTGTACAATTTCGGCGCAAAGATT---GCTGTTTCGGATCACTCC 137639 ||| | ||||| |||||||||| |||||| || || || ||| ||| Sbjct 356816 ATCCTTGGAGGAGTATTCAACAATTTCGGTGCAAAGGTTTGAGCACTT---GATGGTTCC 356760 Query 137640 CAAATTCTTTTGATTGTTTTTCTCGTTGACGTGATCTTTATATATCATATACGGAGTTCC 137699 | |||| ||||| ||||| |||| ||| ||||| | ||| |||||| || Sbjct 356759 GATGTTCTGCTGATTACTTTTCCTGTTGCAAGCATCCTTATACAGCATGTACGGAACACC 356700 Query 137700 GGTTTCGACTTGAGTCTC 137717 |||||| ||||| | ||| Sbjct 356699 GGTTTCCACTTGGGACTC 356682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445067933574240