Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq4651 172 6e-38 >seq4651 Length=474197 Score = 172 bits (190), Expect = 6e-38 Identities = 217/298 (73%), Gaps = 0/298 (0%) Strand=Plus/Plus Query 146924 GCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCT 146983 |||| | |||||| ||||||| ||| ||| || ||| ||| || || |||||| Sbjct 349690 GCTCGAGGTGGTTCAGGTAGAGGTGGCAGTCGCCGCCGGTCCACACGAAATCGCCCGGCG 349749 Query 146984 TAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGG 147043 |||| ||| ||||||||||| |||| |||| ||||||||| |||||||||| Sbjct 349750 CGTAGCCGCACACCTGGGCCACCATCATCGTGAAGAGCGCGTAGCTGGCGATGTTGAAGG 349809 Query 147044 GGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGG 147103 | || |||||| ||||| | | ||| || ||||||||||| |||| ||||||| Sbjct 349810 GAACGCCCAGGAAGATGTCGGCGCTGCGCTGATAGAGCTGGCACGACAGCTTGCCGTCGG 349869 Query 147104 CCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGG 147163 ||||||| |||||| |||| |||||| |||||||| |||||| | || ||| || | Sbjct 349870 CCACGTAGAACTGGAACAGCGCGTGGCAGGGCGGCAGGGCCATGCGGTCCACGTCGGCCG 349929 Query 147164 GGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGAT 147221 ||||||||||||| || | | || | | || |||||| |||| | | | ||||| Sbjct 349930 GGTTCCAGGCCGACACGATGTGGCGGCGGGAGTCCGGGTTCTTCTTGAGCGCCTCGAT 349987 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583453304344800