Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_026607.2 Length=159914 Score E Sequences producing significant alignments: (Bits) Value seq888 104 2e-17 >seq888 Length=58548 Score = 104 bits (114), Expect = 2e-17 Identities = 186/272 (68%), Gaps = 0/272 (0%) Strand=Plus/Plus Query 133261 ATTGATTTGCAGACCATAGTCTAGATGACGAATACGGTTTTCATCTACGCCTTTGTTGTT 133320 |||||| |||| ||||||||| | ||| ||||| |||||||| || || || |||||| Sbjct 24157 ATTGATCTGCACACCATAGTCCAAATGGCGAATGCGGTTTTCCTCCACACCGCGGTTGTT 24216 Query 133321 CTTTAATACCAACAGGTTTTCAACCTCAAGATGCCACATTGGATAATAAAGAGTAGCTGC 133380 ||| | |||| ||| ||| || || || ||||||| || || | || || || || Sbjct 24217 CTTGAGCACCAGCAGCGATTCCACTTCCAGGTGCCACAGGGGGTAGAACAGCGTGGCCGC 24276 Query 133381 ACCACCACGTACACCGCCTTGAGAACAAGATTTTACTGCAGTCTGAAAATGTTTCCAGAA 133440 || || || |||||||| || || || || || || |||| ||| || || |||| Sbjct 24277 CCCTCCCCGCACACCGCCCTGCGAGCAGGACTTGACGGCAGCCTGGAACATCTTGAAGAA 24336 Query 133441 AGGAATTACGCCAGTATGTTTTACTTCGCCATTACCAATTTTTGAGCCTTCAGCTCGAAT 133500 || | ||| || || | ||||||| | |||| ||| | || || || Sbjct 24337 GGGCAGGCAGCCCGTGTGCTGCGCTTCGCCGCCCCGGATTTCGCTGCCCACGGCACGGAT 24396 Query 133501 CATACCGGCGTTGATGCCGATACCAGCTCGCT 133532 ||| | ||||||||||| ||||| |||| Sbjct 24397 ACGGCCGCCATTGATGCCGATGCCAGCGCGCT 24428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511566379175280