Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq622 149 9e-31 >seq622 Length=114055 Score = 149 bits (164), Expect = 9e-31 Identities = 332/493 (67%), Gaps = 28/493 (6%) Strand=Plus/Plus Query 161306 GTCCGTATCTACCAGGCATCCACCAGTGAGTTGTATGGGTTGGTACAAGAGACACCACAG 161365 ||||| |||| |||||| ||| || ||||||| || || ||||||||| Sbjct 6326 GTCCGGTTCTATCAGGCAAGTACCTCAGAACTGTATGGAAAAGTCGTTGAAACACCACAG 6385 Query 161366 AAAGAAACAACACCTTTCTACCCACGATCTCCATATGGCGTAGCTAAACTCTATGGATAT 161425 || || | || |||||||| ||||||||||| |||| | || || | || ||||| Sbjct 6386 AATGAGAAGACGCCTTTCTATCCACGATCTCCGTATGCCTGCGCCAAGATGTACGGATAC 6445 Query 161426 TGGATTGTAAAGAACTACAGAGAGAGTTATGGGATGCACGCCAGTAGTGGTATTCTATTC 161485 |||||||| | ||||| | || ||| ||| || ||| ||||||||| ||| Sbjct 6446 TGGATTGTGATCAACTATCGGGAAGCTTACAATATGTTTGCATGTAATGGTATTCTGTTC 6505 Query 161486 AACCATGAGTCACCACGACGGGGTGAGACTTTCGTAACCCGTAAGATTAC----TAGGGG 161541 || || ||||| || || || || |||| |||||| ||| | || || || | || | Sbjct 6506 AATCACGAGTCGCCTCGTCGAGGAGAGAATTTCGTGACCAGGAAAATCACCCGATCGGTG 6565 Query 161542 -----ACTATCCCGTATTAGTACAGGACTACAGGATTGTCTATACCTAGGTAATCTAAAC 161596 | |||||| | | ||| |||||| || | || || ||| | || Sbjct 6566 GCGAAAATATCCCTGAAT----CAG-----ATGGATTGCCTGGAGCTGGGCAATTTGGAC 6616 Query 161597 TCAAGACGAGATTGGGGTCATGCTGAAGACTATGTGGAGGCTATGTGGTTGATGTTACAA 161656 |||| || || |||||||||||| | ||||| ||||| || |||||| ||||||| ||| Sbjct 6617 TCAAAGCGTGACTGGGGTCATGCTCAGGACTACGTGGAAGCCATGTGGATGATGTTGCAA 6676 Query 161657 CAGGAAACTCCTGATGACTATGTGATTGCCACAGGTAAAGAGT---ATTCAGTGAAGGAC 161713 ||| ||| | ||||| || |||||||| || |||| | || |||| || Sbjct 6677 CAGCCCCAGCCTCAAGACTACGTAATTGCCACTGG---CGAGTGCCACTCGGTGAGAGAA 6733 Query 161714 TTTGTAGAGGCAT--CTGCTGAATACTTTGGTATGAAGATTGAGTGGCAGGGTGAAGGAT 161771 ||||| || |||| || | | || |||| | |||||||||| ||| ||||||| Sbjct 6734 TTTGTCGA-GCATTCCTTCAG-GCACATTGGGCGCGAAATTGAGTGGCGGGGAGAAGGAT 6791 Query 161772 TGGATGAAGTGGG 161784 || | || || || Sbjct 6792 TGAACGAGGTCGG 6804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729886196561160