Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_027204.1 Length=194701 Score E Sequences producing significant alignments: (Bits) Value seq4721 82.4 1e-10 >seq4721 Length=367317 Score = 82.4 bits (90), Expect = 1e-10 Identities = 126/179 (70%), Gaps = 3/179 (2%) Strand=Plus/Minus Query 141286 AAGCAGGTTGGCGCGGATTTCCCGGTATTCCTTGACGCACAAAACCGCGA---ACACGCA 141342 |||| ||| ||| |||||||||||| ||||| || | | | || ||| | |||| Sbjct 17203 AAGCCGGTCGGCAAGGATTTCCCGGTCTTCCTCCACCCGCGCACCCACGAGGAATACGCG 17144 Query 141343 CTCGCCCGGATCGAACGCAAGATCGGCGAAGGCTACAAGGGATTCGAATGCGCCTTTGAC 141402 || ||||| | ||| ||||||| || |||||| || |||| | | | ||| Sbjct 17143 CTGGCCCGTACCGAGCGCAAGACCGCGCCGGGCTACGCCGGCTTCGTGTTCCACACCGAC 17084 Query 141403 ACGTCGATCACCATCGAACAAGACCTGATGCGCCGCGATCTTACCATCAACGCCATGGC 141461 ||||| | || ||||| ||||||| |||||||| || |||||||||||||| || Sbjct 17083 CCGTCGGTGACGCTCGAAGAAGACCTCGCCCGCCGCGACCTCACCATCAACGCCATCGC 17025 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622878159904920