Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_027344.1 Length=158099 Score E Sequences producing significant alignments: (Bits) Value seq888 96.9 4e-15 >seq888 Length=58548 Score = 96.9 bits (106), Expect = 4e-15 Identities = 122/168 (73%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 14843 ATTGATTTGCAGACCGTAATCTAGATGACGAATGCGGTTTTCATCTACACCTTTGTTGTT 14902 |||||| |||| ||| || || | ||| |||||||||||||| || ||||| |||||| Sbjct 24157 ATTGATCTGCACACCATAGTCCAAATGGCGAATGCGGTTTTCCTCCACACCGCGGTTGTT 24216 Query 14903 CTTTAATACCAAAAGGTTTTCAACCTCAAGATGCCACATTGGATAATAAAGAGTAGCTGC 14962 ||| | |||| || ||| || || || ||||||| || || | || || || || Sbjct 24217 CTTGAGCACCAGCAGCGATTCCACTTCCAGGTGCCACAGGGGGTAGAACAGCGTGGCCGC 24276 Query 14963 ACCACCACGGACACCGCCTTGAGAACAAGATTTTACTGCAGTCTGAAA 15010 || || || |||||||| || || || || || || |||| ||| || Sbjct 24277 CCCTCCCCGCACACCGCCCTGCGAGCAGGACTTGACGGCAGCCTGGAA 24324 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505758724533480