Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_027382.1 Length=37146 Score E Sequences producing significant alignments: (Bits) Value seq265 86.0 1e-12 >seq265 Length=448903 Score = 86.0 bits (94), Expect = 1e-12 Identities = 199/300 (66%), Gaps = 0/300 (0%) Strand=Plus/Minus Query 13749 ATCCGTTTCCCTAACAGCGGATTTAAGGTGCAGGCGCTGTCAAGCCGTCCGTCTAACCTG 13808 ||||| ||||| | || ||| |||| ||||||||| || || || || |||||| Sbjct 60661 ATCCGGTTCCCGGATGCGGGGTTTCGGGTGGTGGCGCTGTCCAGTCGGCCTTCCAACCTG 60602 Query 13809 CGTGGTTTGCAGGGGGACGTGGTGATTGATGAGGCGGCATTTCATGAAGCCCTGGACGAA 13868 |||||| ||||| | | || |||||||| || || || |||||| ||| || Sbjct 60601 CGTGGTCGTCAGGGCATCATCGTTATTGATGAAGCCGCGTTCCATGAACAGTTGGGGGAG 60542 Query 13869 CTCCTGAAAGCGGCTTTTGCTCTCACCATGTGGGGTGCCCGCGTGCGGATCATATCGACA 13928 || ||||| || || | || | || ||||| | | ||||| |||| || || Sbjct 60541 CTACTGAAGGCCGCGCTGGCGATGCTGATTTGGGGCGGCAAGGTGCGCGTCATCTCCACC 60482 Query 13929 CATAACGGCGTCGATAACCTGTTTAACCAGTACATTCAGGATGCGCGCGAGGGGCGCAAG 13988 ||||| || ||||| |||| ||| || || | | ||| |||| || ||| Sbjct 60481 CATAATGGTGTCGAAAACCCGTTCAATGTGTTGCTGAATGATATCCGCGCAGGACGCCGT 60422 Query 13989 GATTACAGCGTTCACCGCATCACGCTGGATGATGCCATCGCTGACGGGTTGTACCGACGT 14048 || |||||| || |||||| | | || || || | || || ||||||| ||| ||| Sbjct 60421 GACGGCAGCGTGCATCGCATCCCCTTTGAGGAGGCGGTGGCCGAGGGGTTGTTCCGCCGT 60362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 118738892135272