Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_027402.1 Length=240413 Score E Sequences producing significant alignments: (Bits) Value seq4651 89.7 8e-13 >seq4651 Length=474197 Score = 89.7 bits (98), Expect = 8e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 198329 CTTTCATGTCAGCTCTATCAACGCAGTGCGGATTTTTTCCTCGGCGTGCCGTTCAACATC 198388 || || || ||||||||||| ||||| || || | ||||| ||||| || ||||||||| Sbjct 349858 CTGTCGTGCCAGCTCTATCAGCGCAGCGCCGACATCTTCCTGGGCGTTCCCTTCAACATC 349799 Query 198389 GCGTCTTACGCATTACTCGTGCACATGGTTGCCCAGCAGGTTAACATGGTGCCGGGCGAT 198448 || ||||| | || | ||||| |||||| | | | |||||||||| Sbjct 349798 GCCAGCTACGCGCTCTTCACGATGATGGTGGCCCAGGTGTGCGGCTACGCGCCGGGCGAT 349739 Query 198449 TTCATTTGGACGGGCGGTGACACACATCTCTACTCTAATCATCTGGAGCAGGCCAAGCTC 198508 ||| | ||||| ||||| ||| || |||||| || || || ||||||||| || Sbjct 349738 TTCGTGTGGACCGGCGGCGACTGCCACCTCTACCTGAACCACCTCGAGCAGGCCCGCCTG 349679 Query 198509 CAGCTGACGCGTGAGCC 198525 ||||| | || ||||| Sbjct 349678 CAGCTCTCCCGCGAGCC 349662 Score = 86.0 bits (94), Expect = 1e-11 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 197669 GATCGTACTGGAACAGGGACGCTTTCTGTCTTTGGACGCCAGATGCGTTTTGATTTGCGT 197728 || || || || || || || || || ||||| || | |||||||| || ||| | Sbjct 350275 GACCGCACCGGCACCGGCACCCTCTCGGTCTTCGGCTGGCAGATGCGCTTCGATCTCGCC 350216 Query 197729 AAAGGTTTCCCGTTAGTCACGACTAAGAAACTCCACCTGCGTTCTATTATCCATGAACTG 197788 | ||||| ||| | |||| || ||||| |||||| || || || ||||| || ||| Sbjct 350215 GACGGTTTTCCGCTGCTCACCACCAAGAAGCTCCACACCCGCTCGATCATCCACGAGCTG 350156 Query 197789 CTGTGGTTCCTTAGTGGGGATACCAACACCAAATATCTGGAAGATAACGGCGTTACCATT 197848 ||||||||||| | || || ||||||| | ||||| | || ||| ||| | || Sbjct 350155 CTGTGGTTCCTGCGCGGCGACACCAACATCCGGTATCTCAAGGACAACAAGGTTTCGATC 350096 Query 197849 TGGCGGGAGTGGCAAGATGAAAATGGGAACCTTGGCCCCCTGTATGG 197895 ||| |||||| || || || || | || ||||| |||| || Sbjct 350095 TGGGACGAGTGGGCCGACGAGAACGGCGAGCTGGGCCCGGTGTACGG 350049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 769147861825560