Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq4284 84.2 2e-11 >seq4284 Length=891408 Score = 84.2 bits (92), Expect = 2e-11 Identities = 115/161 (71%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 44120 TTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTT 44179 || |||||||| | || || || || | |||||||| ||||||||| ||| || Sbjct 85208 TTCGGAGAACGCGTCGTAGCCTTCGCCGCCGTGGAAGGTATTTTCTTTAGTGGAAGTTTC 85267 Query 44180 GCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAG 44239 || |||| |||||||| ||||| || || ||||||||||| | || || || || || Sbjct 85268 GCATCCATCTTTTGGTTGAAGAAGCGTGGACTGATGCCTGGGCTAACATTCTCCAACGAA 85327 Query 44240 TTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTG 44280 || || ||||| |||||| | || || |||||||| Sbjct 85328 TTGATCTCACGTGACGAAGGCCTGCACACGGACTTTGCTTG 85368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397432957115785