Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_027991.1 Length=147303 Score E Sequences producing significant alignments: (Bits) Value seq4651 147 2e-30 >seq4651 Length=474197 Score = 147 bits (162), Expect = 2e-30 Identities = 184/252 (73%), Gaps = 14/252 (6%) Strand=Plus/Plus Query 58103 GGCTGTAAAGCGGGGCTGGTATTCAACCCGGCAACGCCGCTCAGTTATCTCGATTACGTC 58162 ||||| || || || ||||| ||||||||||| ||||||||||| | | || ||||| Sbjct 4098 GGCTGCAAGGCCGGCCTGGTGTTCAACCCGGCCACGCCGCTCAGCTGGATGGACTACGTG 4157 Query 58163 ATGGACAAACTGGATGTGATCCTGCTGATGTCCGTGAACCCAGGCTTCGGCGGCCAGTCT 58222 |||||||| || || ||| | ||| ||||| ||||||||| ||||||||||||||||| Sbjct 4158 ATGGACAAGCTCGACGTGGTGCTGGTGATGAGCGTGAACCCGGGCTTCGGCGGCCAGTCG 4217 Query 58223 TTTATTCCGCAGACGCTGGATAAACTGCGCGAAGTGCGTCGCC-GCATTGATGCGT---- 58277 || ||||| | || || || |||||||||| || |||| | || || || | Sbjct 4218 TTCATTCCCGGTGCCCTCGACAAGCTGCGCGAAGCCCG-CGCCAGGATCGACGCCTACAC 4276 Query 58278 --------CCGGTTACGACATTCGCCTGGAAGTGGACGGCGGCGTGAAGGTGAACAATAT 58329 | || ||| || | ||||| ||||| ||||||||||||||| |||| || Sbjct 4277 CGCCCGCACGGGCCGCGAGATCCTGCTGGAGGTGGATGGCGGCGTGAAGGTGGACAACAT 4336 Query 58330 CGGCGAGATCGC 58341 || | |||||| Sbjct 4337 CGCCCGGATCGC 4348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471213578796360