Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_027995.1 Length=41666 Score E Sequences producing significant alignments: (Bits) Value seq476 143 7e-30 seq818 111 4e-20 >seq476 Length=182463 Score = 143 bits (158), Expect = 7e-30 Identities = 200/275 (73%), Gaps = 4/275 (1%) Strand=Plus/Plus Query 41187 ATTGGCAACTTAGGCAACGATCCAGAAATCCGTTACATGCCAAGCGGCGGCGCGGT-TGC 41245 || ||||| | ||||| || || |||| ||| ||| || ||||||| |||| | ||| Sbjct 52667 ATCGGCAATCTGGGCAAGGACCCCGAAACCCGCTACGCCCCGAGCGGCGACGCGATCTGC 52726 Query 41246 TA-ATCTAAGCATCGCCACAACTGAAAGCTGGAAGGATAAAACCACCGGCGAGAAGAAAG 41304 | ||| | || | ||||| || || | |||| || || |||||||||| ||| | Sbjct 52727 AACATC-ACGC-TGGCCACCACCGACAACTGGCGCGACAAGGCCACCGGCGAAAAGCGCG 52784 Query 41305 AACAAACGGAATGGCACCGCGTTGTCATCTTCGGTAAGCTGGCAGAAATTGCTAGCGAAT 41364 | || |||||||||||||| || ||||||| ||||| || || || || || | | Sbjct 52785 AGGCCACCGAATGGCACCGCGTGGTGTTCTTCGGCAAGCTCGCCGAGATCGCCGGCCAGT 52844 Query 41365 ACCTGCGCAAAGGTAGCAAGGTGTTCATTGAAGGCAGCCTGCGAACGCGTAAATGGCAGG 41424 |||||||||| || ||| |||||| | |||||| |||||| || || || ||||||| Sbjct 52845 ACCTGCGCAAGGGCAGCCAGGTGTATGTGGAAGGCTCCCTGCGCACCCGCAAGTGGCAGG 52904 Query 41425 ACCAGGCTGGCGTTGATCGCTACACCACTGAAATC 41459 || ||| ||| || || |||||||| |||||| Sbjct 52905 ACAAGGACGGCCAGGACCGTTACACCACCGAAATC 52939 >seq818 Length=58372 Score = 111 bits (122), Expect = 4e-20 Identities = 179/252 (71%), Gaps = 4/252 (2%) Strand=Plus/Plus Query 41188 TTGGCAACTTAGGCAACGATCCAGAAATCCGTTACATGCCAAGCGGCGGCGCGGTTGCTA 41247 |||||||||| || | | ||| || | ||||| ||||| | ||||||||||| || | Sbjct 56011 TTGGCAACTTGGGGCAGGCTCCCGAGGTGCGTTATATGCCGAATGGCGGCGCGGTAGCCA 56070 Query 41248 ATCTAAGCATCGCCACAACTGAAAGCTGGAAGGATAAAACCACCGGCGAGAAGAAAGAAC 41307 || | | | || || |||||| ||| || ||| ||||| ||| ||| |||| Sbjct 56071 ATTTGACGCTGGCAACCTCTGAAACATGGCGTGACAAACAGACCGGTGAGCAGAGAGAAA 56130 Query 41308 AAACGGAATGGCACCGCGTTGTCATCTTCGGTAAGCTGGCAGAAATTGCTAGCGAATACC 41367 | ||||||||||| || || ||| | ||||| || || || ||||| || | || || | Sbjct 56131 ACACGGAATGGCATCGTGTGGTCTTGTTCGGGAAACTCGCGGAAATCGCCGGAGAGTATC 56190 Query 41368 TGCGCAAAGGTAGCA-AGGTGTTCATTGAA-GGCAGCCTGCGAACGCGTAAATGGCAGGA 41425 | | |||| | || |||| | ||| ||| ||||| |||| || || || |||||||| Sbjct 56191 T-CCAGAAGGGATCACAGGTTTACATCGAAGGGCAG-TTGCGTACCCGGAACTGGCAGGA 56248 Query 41426 CCAGGCTGGCGT 41437 | | || ||||| Sbjct 56249 CGATGCAGGCGT 56260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133202075072952