Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq73 82.4 6e-11 >seq73 Length=471406 Score = 82.4 bits (90), Expect = 6e-11 Identities = 115/159 (72%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 111778 CCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACA 111837 || || | ||| || ||||| | || |||| | |||||||| || || ||||| || Sbjct 407925 CCTGTAACGTGGGCCATCATATGAGTCAGTAAAGCATAACTAGCGATATTGAATGGGACT 407984 Query 111838 CCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTTTATTTTGTGACACA 111897 || ||||||||||| | |||| |||||||| |||||| || |||| | || ||| Sbjct 407985 CCGAGGCCCATATCAGCTGATCGTTGATATAACTGACACGAAAGTTCTCCATTTGCCACG 408044 Query 111898 TAAAATTG-ACAAAGTACATGACAAGGAGGCAATGCCAT 111935 ||||||| | ||| | ||| |||||||| | ||||| Sbjct 408045 AAAAATTGCGCCAAGCA-ATGGCAAGGAGGAAGGGCCAT 408082 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391922876586391