Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq4651 125 6e-24 >seq4651 Length=474197 Score = 125 bits (138), Expect = 6e-24 Identities = 158/217 (73%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 29951 ACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGC 30010 || || |||| ||| ||||| ||| | ||||||||||||||| ||||| || || || Sbjct 349761 ACCTGGGCCACCATCATCGTGAAGAGCGCGTAGCTGGCGATGTTGAAGGGAACGCCCAGG 349820 Query 30011 CCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCACGTAAAAC 30070 ||||| | | ||| |||||||| ||||| |||| |||||| |||||| ||| Sbjct 349821 AAGATGTCGGCGCTGCGCTGATAGAGCTGGCACGACAGCTTGCCGTCGGCCACGTAGAAC 349880 Query 30071 TGACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCG 30130 || ||| |||||||| || || || |||||| || ||| ||| ||||||||||| Sbjct 349881 TGGAACAGCGCGTGGCAGGGCGGCAGGGCCATGCGGTCCACGTCGGCCGGGTTCCAGGCC 349940 Query 30131 CACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGA 30167 |||||||| ||| | | || ||||| ||| ||| Sbjct 349941 GACACGATGTGGCGGCGGGAGTCCGGGTTCTTCTTGA 349977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406286843773644