Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_028657.1 Length=60919 Score E Sequences producing significant alignments: (Bits) Value seq476 206 1e-48 seq1991 95.1 5e-15 >seq476 Length=182463 Score = 206 bits (228), Expect = 1e-48 Identities = 218/287 (76%), Gaps = 0/287 (0%) Strand=Plus/Plus Query 7282 GTTAACAAAGTCATTCTGGTTGGTAACGTCGGTGGTGACCCGGAAACCCGCTACATGCCC 7341 || ||||| || ||||| | || || | || ||||| |||||||||||| || Sbjct 52649 GTCAACAAGGTGATTCTTATCGGCAATCTGGGCAAGGACCCCGAAACCCGCTACGCCCCG 52708 Query 7342 AACGGCAATGCGGTGACCAACATCACCCTCGCCACCAGCGAGAGCTGGAAGGACAAGCAG 7401 | |||| | ||| | ||||||||| || ||||||| ||| | |||| |||||| Sbjct 52709 AGCGGCGACGCGATCTGCAACATCACGCTGGCCACCACCGACAACTGGCGCGACAAGGCC 52768 Query 7402 ACCGGCCAGCAACAGGAACGCGCCGAGTTCCACCGCGTGGTGTTCTTCGGTCGCCTGGCG 7461 |||||| | | | || | |||| | |||||||||||||||||||| || || Sbjct 52769 ACCGGCGAAAAGCGCGAGGCCACCGAATGGCACCGCGTGGTGTTCTTCGGCAAGCTCGCC 52828 Query 7462 GAGATCGCCGGCGAGTACCTGCGCAAGGGTTCCCAGGTCTACGTCGAAGGCAGCCTGCGC 7521 |||||||||||| |||||||||||||||| |||||| || || |||||| ||||||| Sbjct 52829 GAGATCGCCGGCCAGTACCTGCGCAAGGGCAGCCAGGTGTATGTGGAAGGCTCCCTGCGC 52888 Query 7522 ACCCGCAAGTGGCAGGCTCAGGACGGCCAGGACCGATACACCACCGA 7568 |||||||||||||||| |||||||||||||||| ||||||||||| Sbjct 52889 ACCCGCAAGTGGCAGGACAAGGACGGCCAGGACCGTTACACCACCGA 52935 >seq1991 Length=9072 Score = 95.1 bits (104), Expect = 5e-15 Identities = 121/164 (74%), Gaps = 2/164 (1%) Strand=Plus/Minus Query 53678 TCATCGCGGTACACGAACATGACGATGTCGGCGTCTTGCTCAATGGCGCCGGACTCGCGC 53737 || |||||||| | |||||||| |||||| || || ||||| |||||||| || |||||| Sbjct 5263 TCGTCGCGGTAGATGAACATGATGATGTCCGCATCCTGCTCGATGGCGCCCGATTCGCGC 5204 Query 53738 AGGTCGCTGAGGACCGGACGCTTGTCGGGGCGAGACTCGCACC-CTCGGTTTAGCTGGCA 53796 |||||||| | | || |||||||||| ||| ||| |||| ||||| ||||| | Sbjct 5203 AGGTCGCTCATCATGGGCCGCTTGTCGGTGCGCTGCTC-CACCGAGCGGTTGAGCTGCGA 5145 Query 53797 GAGGGGAAGCACAGGACACCCAATCTCCCTTGCCAACAGCTTCA 53840 || | | ||| || || | |||| | |||| || ||||| Sbjct 5144 CAGCGCGATCACCGGGCATTGCAGCTCCTTGGCCAGCATCTTCA 5101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194808194785154