Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_028748.2 Length=51366 Score E Sequences producing significant alignments: (Bits) Value seq818 91.5 5e-14 >seq818 Length=58372 Score = 91.5 bits (100), Expect = 5e-14 Identities = 130/182 (71%), Gaps = 6/182 (3%) Strand=Plus/Minus Query 22191 TACTTTCTACACTTTGCGTATAACCAAATATTCATAGGACGGTTATTTACAACCTCAAGT 22250 ||||| | ||||| |||| | ||| ||||||||||| || ||| ||||| || | | Sbjct 7547 TACTTGCGGCACTTGGCGTGAAGCCAGATATTCATAGGCCGCAGATTAACAACTTCCACT 7488 Query 22251 TCATCAAAATCAAAGTCCGCATGCCTATC---TAAATAATCTTCAATGATTTTCTGTAAA 22307 || ||||| ||||| || |||| |||| || | || | ||| |||| || | | Sbjct 7487 TCGTCAAATTCAAAATCGGCAT---TATCAATTAGCCAGTCCTGAATAATTTCTTGGAGA 7431 Query 22308 TCTTCTTCGTTAATCTCTATTTTTCGTTCTACAAATCCTTCTTTGCTATAATATTTGACT 22367 || | |||| || ||||||||| || || ||||||||||| | |||| ||||| || Sbjct 7430 TCATTATCGTCAAGCTCTATTTTGCGCTCAACAAATCCTTCGTCTTTATAGTATTTAACA 7371 Query 22368 GG 22369 || Sbjct 7370 GG 7369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 164240321642752