Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_028943.1 Length=29237 Score E Sequences producing significant alignments: (Bits) Value seq378 131 3e-26 seq265 95.1 2e-15 >seq378 Length=222826 Score = 131 bits (144), Expect = 3e-26 Identities = 168/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 22015 GAGGGGGATACACTGGTGGTCTGGAAGCTGGACAGGCTGGGGCGTAATATGCGGCATCTG 22074 ||||| || || ||||| ||||||||||| ||| |||||||||| | |||| || Sbjct 58035 GAGGGCGACACCCTGGTCGTCTGGAAGCTCGACCGGCTGGGGCGCTCGGTCAGGCAGTTG 58094 Query 22075 GTCATTCTGGTTGAGGAACTGCGCGAACGCGGCGTTAATTTTCGCAGCCTGACGGATGCT 22134 ||| |||||| | || |||| | | |||||| | || | |||||||| || || Sbjct 58095 GTCGATCTGGTCGGCGATCTGCACAGGCACGGCGTCCAGTTCAGGAGCCTGACCGACGCC 58154 Query 22135 ATTGATACCAGCACGCCGATGGGGCGTTTTTTCTTTCATGTGATGGGTGCCCTGGCTGAA 22194 || || ||| || |||| || || || ||||| || || |||| ||||| ||| Sbjct 58155 ATCGACACCGGCGCGCCTTCCGGCCGGTTCTTCTTCCACGTCATGGCGAGGCTGGCCGAA 58214 Query 22195 ATGGAACGAGAACTCATTGTCGAGCGGACTCGGGCCGGGCTGGAAGCGGCCA 22246 |||||||| ||||| | ||||||||||| || ||||| ||||||| |||| Sbjct 58215 ATGGAACGCGAACTGACCGTCGAGCGGACCCGCGCCGGACTGGAAGTCGCCA 58266 >seq265 Length=448903 Score = 95.1 bits (104), Expect = 2e-15 Identities = 117/160 (73%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 21564 TTAATAATCCCCTTCCGTTATCCACTCCACGCCCATCATCCCAGCCACGAATAAACTCAC 21623 |||||||| | | || |||| || || || |||||||||||||| ||||||||||| | Sbjct 40634 TTAATAATGCTCGACCACTATCTACACCTCGGCCATCATCCCAGCCGCGAATAAACTCCC 40693 Query 21624 CGCGTAAATCAGGCAATTTATTTGTCGGGTAAACCTTTGCCAGTTCCGGGTATTCTTCAG 21683 |||| | |||||||| ||| || ||| || | |||||| |||||||| ||| Sbjct 40694 CGCGCAGATCAGGCAGTTTGCCCTCAGGATAAGCCGTCGCCAGTAGCGGGTATTTTTCCT 40753 Query 21684 CAGAAAAAGCCGCCCCGTTGCATTTCAGCCAGCCTGTCGG 21723 | ||| | ||| || || ||||||| ||| || || || Sbjct 40754 TATCAAATGTCGCGCCATTACATTTCAACCAACCAGTGGG 40793 Score = 86.0 bits (94), Expect = 1e-12 Identities = 79/99 (80%), Gaps = 1/99 (1%) Strand=Plus/Minus Query 7062 CGCCACCAGTGCCGGCGCGCCTCCGGTGTATTCGTGCACCTGCATTAAAACCGACCCATA 7121 |||| ||||||| |||||| || | | | | |||| |||||| |||| || ||| Sbjct 362231 CGCC-CCAGTGCTGGCGCGACTTCAAGGCAGGCATGCAACTGCATGAAAAGCGCTACATG 362173 Query 7122 AAGCGGGCAGGCGAGGCGGGGATAGCACTGCGCGCTGGC 7160 ||||||||||||||||||||||||||| ||||||| ||| Sbjct 362172 AAGCGGGCAGGCGAGGCGGGGATAGCATTGCGCGCAGGC 362134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 93431521813566