Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq4651 129 5e-25 seq73 91.5 1e-13 >seq4651 Length=474197 Score = 129 bits (142), Expect = 5e-25 Identities = 204/285 (72%), Gaps = 8/285 (3%) Strand=Plus/Plus Query 29659 GTGGTCAAGGTAGACGTGAGCA-TCTCCCAGGGTGTGGACAAACTCTCCCGGTTC-TAGC 29716 ||||| ||||||| ||| ||| || || ||| || || || ||||| | |||| Sbjct 349697 GTGGTTCAGGTAGAGGTG-GCAGTCGCCGCCGGTCCACACGAAATCGCCCGGCGCGTAGC 349755 Query 29717 CCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACC 29776 | | || || |||| ||| ||||| ||| | ||||||||||||||| ||||| || Sbjct 349756 C-GCACACCTGGGCCACCATCATCGTGAAGAGCGCGTAGCTGGCGATGTTGAAGGGAACG 349814 Query 29777 CCGAGCCCCATGTC--CCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTCA 29834 || || ||||| | ||| | ||| |||||||||||||| |||| |||||| || Sbjct 349815 CCCAGGAAGATGTCGGCGCTG--CGCTGATAGAGCTGGCACGACAGCTTGCCGTCGGCCA 349872 Query 29835 CGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCATGAGACCCAAGTCTTTGGGGT 29894 |||| ||||| ||| || ||||| || || ||||||||| | ||| ||| |||| Sbjct 349873 CGTAGAACTGGAACAGCGCGTGGCAGGGCGGCAGGGCCATGCGGTCCACGTCGGCCGGGT 349932 Query 29895 TCCAGGCACACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGA 29939 ||||||| |||||||| ||| | | || ||||| ||| ||| Sbjct 349933 TCCAGGCCGACACGATGTGGCGGCGGGAGTCCGGGTTCTTCTTGA 349977 >seq73 Length=471406 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 29714 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGC 29773 || || || ||||| |||||||| | || || | || || || ||||| || || || Sbjct 407922 AGTCCTGTAACGTGGGCCATCATATGAGTCAGTAAAGCATAACTAGCGATATTGAATGGG 407981 Query 29774 ACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTC 29833 || ||||| ||||| || |||| | || || | ||| ||||| || ||||| | | Sbjct 407982 ACTCCGAGGCCCATATCAGCTGATCGTTGATATAACTGACACGAAAGTTCTCCATTTGCC 408041 Query 29834 ACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCATGAGACCCAAGTCTTTGGGG 29893 ||| |||| || || | |||||| |||||||||||||| | | ||| | ||| Sbjct 408042 ACGAAAAATTGCGCCAAGCAATGGCAAGGAGGAAGGGCCATTTGTGGGATATCTATCGGG 408101 Query 29894 TTCCAGGCACACACGATGATGCG 29916 ||||| |||| || ||| || || Sbjct 408102 TTCCATGCACTCATGATAATACG 408124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406139652307702