Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq4284 127 2e-24 >seq4284 Length=891408 Score = 127 bits (140), Expect = 2e-24 Identities = 187/265 (71%), Gaps = 0/265 (0%) Strand=Plus/Minus Query 4816 GAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCT 4875 |||| ||||| || || || || ||||||||| || | |||||| || ||||| | Sbjct 84835 GAATGTAAGTATCAATAAGCAGCGAGTACATTTCACTGTGGACATTTTCCATTGCAATTT 84776 Query 4876 GAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTA 4935 |||||||||| ||||| | ||||| || || || || || | | || | ||| || | Sbjct 84775 GAAATCCGTAGAAGCAACGCGCTTCGGTGACCTGGACCTCCTGGCTGAAACGTTCCACAA 84716 Query 4936 AGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGT 4995 ||| ||||| || || || || || ||||| || |||| ||||| || || |||| Sbjct 84715 GGTTCTCGTTCACGATGCCATCGGAAGCGGCAAAGAAGGCCAGCACATGTGAGATGAAGT 84656 Query 4996 ACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTT 5055 || ||| | | ||| || |||| ||| | || || |||||||| | ||| ||||| | Sbjct 84655 GCTTCTCGCCGGACTTGAGCTTTTCCCAATCGGCCAGATCTTTAGAGAGATCGACTTCCT 84596 Query 5056 CAACAGTCCAAAACGACGCTTCCGC 5080 | || ||||| || || || || || Sbjct 84595 CTACTGTCCAGAAAGATGCCTCTGC 84571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427024841399081